Detail



ID : Ahg935227

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935227|scaffold_403215.1
Sequence
TTGCTCATAA AAGAACAGTT ATGGTGAGAA TATTCCTTCT CTACAACATA CTAAACTCGT TTCTTCTCTC TTTAGTACCA AAGAAGCTAC AAACTCTCTT CCCTCTCTCT TGGTTCGACA AAACTCTCCA CAAGAACTCA CCACCGTCTC CGTCTACGAT GTTACCTTCT CCGTCATCGT CTTCTGCGCC GACCAAAAGA ATAGATCCGT CCGAGCTCAA ACGCGTTTTC CAGATGTTCG ACAAGAACGG TGACGGTCGA ATCACAAAGG AAGAGCTCAA CGACTCACTA GAGAATCTAG GAATCTACAT ACCAGACAAA GATCTGACTC AAATGATCCA TAAGATCGAC GCAAACGGTG ATGGATGCGT CGACATAGAC GAGTTTGAGT CGCTGTACAG CTCGATTGTG GATGAGCATC ACAACGATGG CGAAACAGAG GAAGAAGATA TGAAAGACGC GTTTAACGTG TTTGACCAAG ATGGAGATGG GTTTATCACT GTGGAGGAGT TGAAATCTGT GATGGCTTCC TTGGGACTCA AGCAAGGGAA AACCCTAGAT GGTTGCAAGA AGATGATTAT GCAAGTTGAT GCAGATGGTG ATGGTAGAGT CAATTACAAA GAGTTTCTTC AGATGATGAA AGGTGGTGGC TTTAGCAGCA GTAATTGATC TTTAACTAGG GTTTGATTTG ACAGAAGAGA AGTGTGTTTA TTCGATTGAT TGGTTTGTTT TTCTTGTTTT TTCCTCTGTA AATAATTATC TGATGACGAA TCAAAACATC GTGTAATCGA AGAAGGTG 
Length798
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20122403.. 20123188
Download Sequence
A.thaliana
AGI-codeAT2G43290.1
DescriptionCalcium-binding EF-hand family protein
TAIR curator summaryEncodes calmodulin-like MSS3.
Alias[MSS3][multicopy suppressors of snf4 deficiency in yeast 3]
Gene coexpression
MR
MR Locus Description
6.16441 Ahg950444 Xyloglucan endotransglucosylase/hydrolase family protein
10 Ahg493755 EF hand calcium-binding protein family
13.1909 Ahg479472 zinc-finger protein 2
14.4222 Ahg940069 NDR1/HIN1-like 3
21.9089 Ahg476579 Protein of unknown function (DUF793)
21.9089 Ahg472163 Nucleotide-diphospho-sugar transferase family protein
21.9773 Ahg345050 zinc finger nuclease 2
22.2486 Ahg949051 calmodulin like 37
28.3901 Ahg471987 PEP1 receptor 2
28.9828 Ahg944499 Calcium-dependent lipid-binding (CaLB domain) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression