Detail



ID : Ahg495780

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495780|fgenesh2_kg.8__1596__AT5G56900.2
Sequence
ATGGCGCCCA GAATTTTGCT CTGCGGAGAT CCTCTTGGAC GTCTCAATCA GCTCTTCAAG CGTGTCCAAT CGGTTAGCAA ATCTGCTGGT CCATTTGATG CTCTGATTTG CGTCGGCCAG TTTTTTCCCG ATTCTCCGGA ACTCCTAGAC GAGTTTCTGG ATTACGTTGA AGGTCGAACT CAAGTTCCGA TTCCTACTTA CTTCACCGGC GACTATGGCG TCGTTGCCCC CAAAATCCTA TCGACGACTT CGAAGAAAGC TGAGAATCAA GGGTTTAAGA TGGATGGACT CGAAGTTTGC CACAATTTGT TTTGGTTAAG AGGAAGTGGG AAGTTCACTC TTCAAGGTTT GTCTGTTGCT TACTTATCTG GTAGACAATC ATCTGATAGT CAATTTGGGA AATATAGTCA AGATGATGTT GATGCTCTTC GTGCACTTGC TGAGGAACCT GGAGTTGTTG ATTTGTTCTT AACATATCCT TTTTTTTTGT ATACTAATGA ATGGCCTGCG GGAGTTACAA ACAGAGCTGC GGTTTCTGAT ATTCCTGTAG GAGTTTCTGA TTCCTCTTGT AGTGATTCCA CTGTTTCTGA ATTGGTAATG GAAGTTAAAC CTCGCTATCA CATTGCAGGT TCTATGGGGG TATTTTATGC CCGTGAACCT TACCTCAACG TTGAATCTAC TCATGTAACT CGCTTTATTG GTCTTGCTCA AGTTGGAAAT AAAAACAAAC AGAAATTTCT TCATGCGCTT TCTCCTACAC CAACATCTAC CATGTCACCA GCAGAGCTTA GTGCAAAGCC TCCAAAAACT ACACTATGGC CTTATAATTT ACAAGAGAGT GCTGCTGAAT CGAAGAAGAG GCCAAACGAC AGTGAATCTG ATTCACAGTA TTGGAGGTAT GATGTCTCAA AGCGGCAAAA GAATGGATCT CAAGGGGAAA AGCTCTGTTT CAAATTTGTC TGCTCAGGTT CCTGTCCTCG GGGTGAAGAT TGCCATTTCC AACACAACGC TGAAGCAAGA GAACAGTGTC GTAGAGGTGT TTGTCTTGAT CTTATCATCA AAGGTAAGTG TGAAAAAGGC CCAGAGTGCA GCTACAAGCA TGAGTTTCAA GATGAAAGTA GCATACAAAG AAAGCCCAGA TCTGAGAATG CTAACAGGTC AAAAGAATGC TGGTTTTGTC TATCAAGCCC GAGTGTGGAG TCACATTTAA TCGTCAGTGT AGGGGAAAGT TTCTATTGTG CTCTACCCAA AGGTTCACTA GTCGAAGACC ACATATTGAT AATCCCAATC GAACATTTGC CCAATACTCT GGTTTTATCC CCTGAGGTTG AATCAGAGCT CAGTAGATAC CAAAATGGTC TGAGAAATTG TTATAACAGC CAAGGAAATG ATGCAGTTTT CTTTGAATTG GTCTCTAAAC GTGTTTCTCA TGCTAACCTC CAAGTTGTTC CGGTTCCATC ATCCAGAGCT CGTCTTCTTC CTAATATCTT TAGTCTGGCG GCTGAAAAAC TGGGCTTTAA GCTTGTGACG AAAAAGTTTA GTGATAGTTC TGATGGCAGA AAGTATCTGC AGAAGGAATA CAATGCAGCT TTGGGGCTCT TCTATGTGGA ACTTCCTGAT GGAACGGTGT TATCTCACAC CCTGGAAGAG AACGAAGTAT TCCCTGCACA ATTTGGACGG GAGGTTCTAG CAGGGTTGCT AAAGATCCCA GATAGGGCCG ATTGGAGAAA CTGTAAAATT AGCCAAGAAG AGGAGGCAAA GCTGGCTGAA GATTTCAAGA AACAATTTCA AGAATTTGAC CCTTGCCAAT AACCTTACTG AACAAAAGAT ACGATCATAT ACTATCTTGT GGGTATCAAT CATATGCTAA ACTCAGTGTC CAGTACACTC AGGTATTGTG TTTCTGAAGC TGAATCATGC GACACATCGT CCTTTAGAAA TAGGTTCATG GTCAGTTAAA AGCTAACAGT CTTCCATCTG TTACCTTACT ATTTTTCTTT TTCTTCTAGT AAACACTTGC TTTGATATAT TATTGTTTGT TGAGATGTAA GAGAGTGATC ATCACAGAAA CACAAAACAG TCATGGTAGA ATTTGCTTCA CCTGTTTTCA CCT 
Length2113
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16716280.. 16719760
Download Sequence
A.thaliana
AGI-codeAT5G56900.2
DescriptionCwfJ-like family protein / zinc finger (CCCH-type) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg490301 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
2 Ahg317312
2.23607 Ahg470277 peroxin 6
2.82843 Ahg329048 Arginyl-tRNA synthetase, class Ic
3.4641 Ahg934151
3.60555 Ahg490495 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
3.74166 Ahg477585 DegP protease 7
5.19615 Ahg471269 S-locus lectin protein kinase family protein
5.65685 Ahg923251 NagB/RpiA/CoA transferase-like superfamily protein
6.78233 Ahg314752 histone mono-ubiquitination 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression