| Annotation |
|---|
| Description | jgi|Araly1|920696|scaffold_101977.1 |
| Sequence |
TTCCGATTAG AACTGATCGA GATGGGTAAT ACAGATAAGC TGATGAACCA AATCTTTGAT TTGAAATTCA CGTCAAAGTC TCTGCAGAGG CAAGCTAGGA AGTGCGAAAG AGAGGAGAAG TCGGAGAAGC TCAAGGTCAA GAAAGCCATT GAGAAAGGGA ACATGGATGG TGCTCGGATC TATGCCGAGA ACGCCATTCG CAAACGCAGT GAGCAGATGA ACTACCTTCG TCTCTCTTCT CGATTGGACG CTGTTGTAGC TCGGCTCGAT ACCCAGGCTA AGATGGCTAC CATCACCAAA TCGATGACTA ACATCGTCAA ATCCCTCGAA TCGACTCTTG CCACTGGTAA CTTACAGAAG ATGTCAGAGA CTATGGATTC GTTTGAGAAA CAGTTTGTGA ACATGGAAGT CCAAGCTGAG TTCATGGAGA ATGCAATGGC TGGTTCCTCT TCATTGTCGA CTCCAGAAGG AGAAGTCAAC AGCTTGATGC AGCAAGTAGC AGATGATTAC GGTCTTGAAG TTTCTGTTGG ACTGCCTCAG CCTGCTGCTC ATGCCATTCC TACCAAGACT GAAGAGAAAG TTGAGGAGGA TGATTTATCT AGGAGACTTG CCGAGCTTAA AGCCAGAGGA TAATTAACTA ACCTAGCAAA AAA |
| Length | 653 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 7100913.. 7102009 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G17730.1 |
| Description | vacuolar protein sorting 46.1 |
| TAIR curator summary | Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein. |
| Alias | [CHMP1B][VPS46.1][CHARGED MULTIVESICULAR BODY PROTEIN/CHROMATIN MODIFYING PROTEIN1B][vacuolar protein sorting 46.1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg897649 | RING/U-box superfamily protein |
| 5.47723 |
Ahg941620 | copper transporter 5 |
| 8.94427 |
Ahg474862 | |
| 12.4499 |
Ahg935295 | MAP kinase 6 |
| 15.1658 |
Ahg472436 | serine hydroxymethyltransferase 6 |
| 20.8327 |
Ahg480957 | |
| 23.622 |
Ahg487366 | sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors |
| 24.7386 |
Ahg929508 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 28.1069 |
Ahg485066 | phosphatidylglycerolphosphate synthase 1 |
| 35.4965 |
Ahg325939 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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