Detail



ID : Ahg935944

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935944|scaffold_500135.1
Sequence
CATAGAACAC AGAAGAATCC ATGGCTGCTT CTTCATCCTC CGCTGCTTCC TTCTTTGGAG TCCGACAAGA TGATCAATCT CACCTCCTCC CTCCTAATTC CTCCGCCGCT GCTCCTCCTC CTCCACCTCC TCACCACCAG ACACCGCTGC CACCGCTTGA AGCTCCACCG CAGAAAAAGA AGAGAAACCA ACCAAGAACT CCAAATTCCG ATGCAGAAGT GATAGCTTTA TCTCCAAAGA CACTAATGGC TACAAACAGA TTCATTTGTG AAGTATGCAA CAAAGGGTTT CAAAGAGAAC AAAATCTACA ACTTCACCGA AGAGGACACA ATCTTCCATG GAAGCTGAAA CAGAAATCGA CCAAAGAAGT GAAGAGAAAA GTGTATCTTT GTCCGGAGCC CTCGTGCGTC CACCATGACC CCTCACGTGC TCTCGGAGAC CTCACCGGAA TCAAGAAACA TTATTACCGT AAACACGGTG AAAAGAAGTG GAAATGCGAT AAATGCTCTA AGCGTTACGC TGTTCAATCA GATTGGAAAG CTCACTCCAA GACTTGTGGT ACCAAAGAGT ATCGTTGTGA CTGTGGTACA CTCTTCTCTC GGCGAGACAG TTTCATCACA CATAGAGCTT TCTGTGACGC GTTGGCTCAA GAGAGTGCGA GACACCCAAC TTCATTGACT TCTTTGCCAA GTCATCACTT CCCGTACGGA CAAAACACCA ACAACTCCAA CAACAACACT TCAAGCATGA TCCTTGGTCT GTCCCACATG GGGGCCCCAC AGAATCATGA TCACCAGTCC GGTGACGTTC TCCGTCTTGG AAGCGGAGGA GGAGGAGCCG CTTCACGGTC TGCCTCTGAT CTCATTGCTG CGAATGCTTC AGGCTACTTC ATGCAAGAGC AAAACCCTAG CTTTCATGAT CAACAAGACC ATCATCATCA TCATCAACAA GGGTTTTTGG CTGCGAACAA TAACATCAAG CCATCACCGA TGAGTTTTCA ACAGAATCTG ATGCAGTTCT CACATGATAA CCATAACTCT GCTTCCTCCA ATCTCTTCAA TCTCAGCTTC CTCTCTGGAA ACAACGGAGT TACTTCTGCG ACAAGCAACC CTAATGCTGC CAATGCTGCC GCTGTTTCTT CGGGTAATCT TATGATTTCA AACCATTTTG ATGGTGAAAA TGCTGTTGGA GGAGGAGGAG GAGGAGAAGG AAGCACTGGT CTCTTCCCTA ACAATCTGAT GAGCTCGGCC GATAGAATCA GCTCAGGATC AGTCCCTTCA CTCTTTAGCT CATCAATGCA AAATCCAAAT TCAGCACCTC ACATGTCAGC CACTGCCCTT CTTCAGAAAG CTGCTCAAAT GGGTTCAACC TCAAGCAACA ACAACAACGG AAGCAACAAT AACAACAATA ACAATGCCTC ATCGATCCTA AGAAGCTTTG GGAGTGGAAT CTACGGAGAA AACGAGAGTA ATCTTCAGGA TTTGATGAAT TCTTTCTCTA ACCCCGGCGC AACGGGAAAC GTTAACGGAG TAGATTCTCC TTTTGGTTCG TATGGAGGAG TGAACAAAGG ATTAAGCGCG GATAAGCAGA GCATGACTAG AGACTTTCTT GGAGTTGGAC AGATCGTAAG AAGCATGAGT GGAAGCGGAG GGTTTCAACA ACAGCAACAG CAGCAACAGC AACAACAACA ACATGGAAAT AGTAGAGAAA GAGTTGGCTC GTCGTCGGAT TCCGCCGATA GAAGCAGCAT GAATGTGAAT ACCGGTGGTG GTCCGGCAAA TACTTCACCA CCTTATGGAA TCCATCATGC GAGTTTCTAA GAAGATAAAA AAGTTTCTAA 
Length1840
Protein Sequence
Protein Residue
Map Locationscaffold_5: 649637.. 653247
Download Sequence
A.thaliana
AGI-codeAT2G02070.1
Descriptionindeterminate(ID)-domain 5
TAIR curator summary
Alias[AtIDD5][IDD5][indeterminate(ID)-domain 5]
Gene coexpression
MR
MR Locus Description
29.6648 Ahg951294 cell wall / vacuolar inhibitor of fructosidase 2
32.8024 Ahg945418 Leucine-rich repeat receptor-like protein kinase family protein
35.4683 Ahg488871 tubulin alpha-5
42.9651 Ahg890387 Kinase-related protein of unknown function (DUF1296)
46.2169 Ahg487711 ATP synthase alpha/beta family protein
52.5833 Ahg934049 Protein of unknown function, DUF642
54.4702 Ahg477396 Phosphoglycerate mutase-like family protein
55.0999 Ahg940220 Integrase-type DNA-binding superfamily protein
70.9084 Ahg478847 pectin methylesterase 3
81.1665 Ahg480606 EXORDIUM like 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression