| Annotation |
|---|
| Description | jgi|Araly1|478847|fgenesh2_kg.3__1548__AT3G14310.1 |
| Sequence |
ATCATCACTC ACCAGTGTCA AACAATGGCA CCATCAATGA AAGAAATCTT TTCCAATAAT TTCAAGAAAA ACAAGAAACT TATTTTGCTA TCCGCCGCCG TAGCTTTGCT CCTCGTAGCC GCCGTCGCCG GAATCTCCGC CGGAGCTTCA AAATCCAACG AAAAACGAAC TCTATCCCCG TCGTCTCACG CCGTGCTAAG ATCCTCCTGC AGCTCCACGC GTTACCCTGA GCTCTGTATC TCCGCCGTGG CAAATACCGG CGGCGTCGAG CTAACGTCGC AAAAAGACGT CATCGAGGCA TCGCTGAACC TTACAATAAT CGCCGTGGAG CACAATTACT TCAACGTGAA GAAGCTGATC AAGAAGAGAA AAGGACTAAC GCCGCGCGAA AAGACAGCGC TTCATGACTG TTTGGAGACT ATTGACGAGA CGCTGGACGA GCTCCATGAA ACGGTGGAAG ATCTACATTT GTATCCAACC AAAAAAACTC TCCGGGAACA CGCCGGAGAT CTCAAAACCC TAATCAGCTC CGCCATTACC AACCAGGAGA CTTGTCTCGA CGGCTTCTCT CATGACGACG CCGATAAGCA AGTTCGTAAA GCCTTGTTGA AGGGTCAGAT ACACGTAGAG CACATGTGCA GCAACGCTCT AGCAATGATC AAGAACATGA CTGATACTGA CATAGCCAAC TTCGAGCAAA AAGCTAAAAT AACCTCAAAC AACCGTAAGC TCAAGGAGGA GAATCAGGAA ACTACGGTGG CAGATATCGC CGGAGCGGGA GAACTAGACT CGGAGGGATG GCCAACTTGG TTATCCGCTG GAGATAGGAG GCTTCTTCAG GGTTCGAGTG TGAAAGCCGA CGCCACCGTG GCAGCTGACG GTAGCGGTAC ATTTAAGACG GTGGCGGCTG CGGTTGCGGC GGCCCCGGAA AATAGTAACA AGAGGTATGT GATACATATT AAAGCCGGGG TTTATAGAGA GAATGTGGAT GTTGCAAAGA AGAAAAAGAA TATAATGTTT ATGGGAGATG GTCGGACGAG AACTGTTATC ACCGGAAGTC GAAACGTCGT CGACGGTAGC ACCACTTTCC AGTCCGCCAC CGTTGCTGCT GTCGGCGAGA GATTCTTAGC TCGTGACATC ACTTTCCAAA ACACGGCGGG TCCGTCGAAG CACCAAGCGG TGGCTCTCCG TGTGGGTTCT GATTTCTCCG CCTTCTACAA TTGCGACATG TTAGCTTACC AAGACACTCT TTACGTCCAC TCTAACCGTC AATTCTTCGT CAAGTGTATC ATCGCCGGAA CCGTCGACTT CATCTTCGGG AACGCCGCCG TCGTGCTCCA AGACTGTGAC ATTCACGCTC GCCGCCCCAA CTCCGGCCAG AAAAACATGG TCACGGCTCA GGGAAGAACG GATCCAAACC AGAACACAGG GATCGTTATC CAGAAATGTA GGATCGGTGC CACGTCAGAT TTACAGTCAG TGAAAGGTAG TTTCCCTACG TACCTTGGTC GGCCGTGGAA GGAGTATTCG CAAACGGTGA TAATGCAGTC GGCTATCTCC GACGTGATCC GACCCGAAGG GTGGTCTGAG TGGACCGGGA CTTTTGCGTT GAACACTCTG ACTTATAGAG AGTATGCGAA TACAGGAGCA GGGGCTGGAA CTGCAAATAG AGTGAAGTGG AGGGGCTTTA AAGTAATTAC GGCTGCTGCT GAAGCTCAAA AATATACGGC TGGTCAGTTT ATTGGTGGTG GAGGCTGGTT ATCGTCGACC GGTTTCCCCT TCTCGCTCGG TCTTTGAGAG ATTGTTGTTG TGTAATGTGT TCCTACGTAT TGTTGGATAT TGTATGAATC AAATCGTGTT GTTCTCTTTG TTTTGTTTTG GGTTGTGTAT TTCTCTATAT CGTAGTATTA GAAACTAGAT GAAATAACGA GGATTTTTTC GCCTTGAGAG GATATTGCCT ATCTGATGAT GATTGACGAT GAAATGATGT CATAATAAAA AAACAAAACA AATACATGTA TTTCTATGTA ACTTCTCTTT CTTTTTGTTG TCAACGAAAT TTATGTCCAT ATAT |
| Length | 2074 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 5662285.. 5665467 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G14310.1 |
| Description | pectin methylesterase 3 |
| TAIR curator summary | encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism. |
| Alias | [ATPME3][OZS2][PME3][pectin methylesterase 3][OVERLY ZINC SENSITIVE 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg476393 | germin-like protein 1 |
| 7.93725 |
Ahg479297 | B-S glucosidase 44 |
| 9.38083 |
Ahg474107 | Leucine-rich repeat (LRR) family protein |
| 10.6771 |
Ahg930439 | UDP-D-glucuronate 4-epimerase 6 |
| 10.8167 |
Ahg493180 | arabinogalactan-protein family |
| 11.3137 |
Ahg926520 | Peroxidase superfamily protein |
| 13.1909 |
Ahg473169 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 13.3041 |
Ahg473170 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 13.7113 |
Ahg951910 | photosystem II subunit T |
| 14.4222 |
Ahg927007 | SKU5 similar 5 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|