Detail



ID : Ahg945418

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945418|scaffold_701647.1
Sequence
TTCTTCTTCC TCATCTTCAT CTTCTCCGAT GCCACCAAAT ATCTATAGAC TCTCCTTCTT CTTATCCCTA CTCTGTTTCT TCTTCATTCC CTGTTTCTTC TCTCTCGACG AACAAGGTCA AGCTCTCTTG TCATGGAAGT CCCAACTGAA CATCTCCGGC GACGCTTTTT CCTCCTGGCA CTTCGCCGAC ACATCTCCCT GCAACTGGGT CGGCGTAAAA TGTAACCGTA GAGGTGAAGT TTCGGAGATA CAACTCAAAG GCATGGACTT GCAAGGTTCT CTGCCGGTGA CGAGTCTCCG GAGCCTCAAG TCTCTTACTT CCCTCACTTT ATCTTCACTC AATCTTACCG GAGTAATCCC CAAGGAGATA GGAGACTTTC TTGAGCTTGA ATTACTCGAT TTATCGGATA ATTCTCTCTC CGGCGATATC CCTGTGGAAA TCTTCAGGCT CAAGAAACTC AAAACTCTGT CTTTGAACAC TAACAATCTC GAAGGTCGGA TTCCGATGGA GATTGGGAAT CTTTCCGGTC TCCTAGAGCT TATGCTTTTC GATAACAAGC TATCCGGAGA GATCCCGAGG AGTATCGGAG AGCTCAAGAA TCTACAAGTC TTACGTGCTG GTGGGAACAA GAATCTAAGA GGTGAGCTTC CTTGGGAGAT AGGAAATTGC GAGAACCTAG TAATGCTTGG TCTCGCTGAG ACTAGTCTCT CCGGTAGACT TCCGGCGTCG GTAGGAAACT TGAAACGTGT TCAGACAATA GCAATTTATA CGTCACTCTT GTCTGGTCCA ATTCCGGATG AGATTGGATA CTGTACGGAG CTCCAAAACC TCTACTTGTA CCAGAACTCG ATCTCCGGAT CGATTCCTAA CACCATTGGA GGTTTAAAGA AGCTGCAGAG CCTACTCTTA TGGCAGAACA ATCTCGTTGG GAAAATGCCT TCAGAGCTTG GGAATTGTCC CGAACTCTGG CTTATCGATT TTTCCGAGAA TCTTCTCACC GGGAACATCC CGAGGAGCTT CGGGAAACTT GAGAATCTAC AAGAGCTTCA ACTGAGCGTA AACCAAATCT CAGGAACAAT CCCTGAAGAG CTAGCGAATT GCACGAAGCT TACGCATTTA GAGATCGACA ATAACCTTAT TACCGGAGAG ATTCCGTCAT TGATGAGTAA CCTAAGAAGC TTAACGATGT TTTTCGCGTG GCAGAACAAG TTAACCGGAA GCATCCCACA GAGTCTCTCC CAGTGTCGTG AGCTTCAAGC CATCGATCTC TCTTACAACA GTCTCTCTGG TTCTATCCCA AAAGAGATTT TTGGGTTACG AAACCTCACG AAGCTTCTTC TTCTCTCCAA TGATTTGTCA GGTTTCATAC CGCCGGATAT TGGAAACTGT ACGAATCTTT ACCGGTTGAG ACTCAACGGA AACAGGATCG CCGGAAGTAT CCCGTCGGAT ATGGGGAACC TGAAAAATCT CAACTTTGTT GATATAAGCG AGAACCGTCT CGTCGGGACA ATCCCTCCGG CGATCTATGG TTGTAAAAGC CTCGAGTTTC TCGATCTTCA CTCGAACAGT CTCTCCGGTT CATTGCTCGG CACACTCCCA AAAAGCTTGA AGTTCATCGA TTTTTCTGAT AACTCTCTGT CTGGTCCTCT GCCTCCGGGA ATAGGATTGT TGACAGAACT AACGAAGCTC AATCTCGCCA AGAACCGATT CTCCGGCGAA ATCCCTAGAC AAATCTCCAC TTGTCGGAGT CTACAGCTTC TTAATCTCGG CGAAAATGCA TTCTCCGGTG AAATCCCAGA CGAATTGGGT CAAATCCCGT CTCTGGCAAT CTCTCTTAAT CTTAGCTGCA ATGGGTTCGT CGGAGAAATA CCGTCGAGAT TCTCCGACTT GAAAAACCTT GGAGTGCTAG ACATCTCTCA CAACCAACTC ACCGGAAACT TGATGGTTTT AACGGATTTG CAAAATCTCG TCTCTCTCAA CGTCTCCTTC AATGATTTCT CCGGCGATTT ACCAAATACT CCCTTTTTCC GGAGACTTCC ACTCTCTGAT CTCGCCTCAA ACAAAGGGCT TTACATTTCT AATGCAATTT CGACCCGATC TGACCCGACG ACCCGGAACA GTTCCGTCGT TAAATTGACC ATTTTAATTC TCGTCGTCGT CACTGCCGTA CTCGTGCTCC TGGCGGTTTA CACTCTAGTC CGGGCACGAG CCGCCGGAAA ACAGCTCCTC GGAGAAGATA TAGATTCGTG GGAAGTGACG CTTTACCAAA AACTCGATTT TTCAATCGAC GACATCGTTA AGAATCTGAC GTCAGCAAAC GTGATCGGAA CCGGAAGCTC CGGTGTGGTA TACCGTATAA CGATTCCCTC CGGCGAGTCT CTGGCGGTGA AGAAAATGTG GTCGAAGGAA GAGAGTGGTG CGTTTAATTC CGAGATCAAA ACTCTAGGAT CGATTCGTCA CAGGAACATT GTTCGTCTTC TTGGTTGGTG CTCTAATCGG AATCTGAAAC TCCTGTTCTA CGACTATCTC CCTAACGGTA GCCTGAGTTC TCGGCTTCAC GGCGCCGGAA AAGGAGGAGG TGTTGATTGG GAGGCTCGAT ACGACGTCGT TCTTGGTGTG GCCCATGCAC TTGCTTATCT CCACCATGAT TGTCTCCCCA CAATTATACA CGGTGACGTT AAAGCTATGA ATGTCTTATT GGGTCCTCAC TTAGAACCCT ACTTAGCTGA TTTCGGTTTA GCTAGAACCG TTTCCGGTTA TCCAAATACT GGAATTGATT TGTCAAAACC CACCAATCGG CCTCCCTTGG CTGGTTCATA TGGTTACATG GCTCCGGAAC ATGCTTCGAT GCAACGTATA ACCGAGAAGA GCGATGTTTA TAGTTACGGA GTGGTATTGT TAGAGGTTCT AACCGGAAAG CATCCGTTAG ATCCGGATCT ACCAGGAGGT TCACATTTGG TTAAGTGGGT GAGAGATCAC TTGGCTGAGA AAAAAGATCC GAGCATGCTT CTTGACTCGA GACTCAATGG GCGGACTGAC TCGATAATGC ACGAGATGCT TCAAACTCTT GCGGTTGCGT TCCTCTGTGT GAGCAACAAG GCAAACGAAC GGCCTTTGAT GAAAGATGTT GTGGCAATGC TCACGGAGAT AAGGCACATT GATGTTGGAC GATCGGAGAC CGATAAGATC AAAACTGGTG GTTGCGGAAG CAAAGAGCCA CAACAATTAA TGTCGAATGA GAAAATCATC AATTCTCACG GTTCGTCTAA TTGTTCATTT GCGTTTTCGG ATGACTCCGT ATAAAAAAAA AACAGTAAAA AATG 
Length3324
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6147279.. 6150690
Download Sequence
A.thaliana
AGI-codeAT4G26540.1
DescriptionLeucine-rich repeat receptor-like protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.8924 Ahg479297 B-S glucosidase 44
23.4307 Ahg934049 Protein of unknown function, DUF642
24.0624 Ahg478847 pectin methylesterase 3
26.533 Ahg489312 30S ribosomal protein, putative
27.4591 Ahg480313 ABC-2 type transporter family protein
28.3196 Ahg951910 photosystem II subunit T
32.7109 Ahg486504 Protein of unknown function (DUF630 and DUF632)
32.8024 Ahg935944 indeterminate(ID)-domain 5
33.7046 Ahg492051 protochlorophyllide oxidoreductase B
36.2215 Ahg494672 COP1-interacting protein-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression