Detail



ID : Ahg936611

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936611|scaffold_500802.1
Sequence
TTTCTAAACA AAAGAGAAAA ATGGGTAAAG AAGGTGAAAA AGAGAGTGGG AGGGACAAGA TGAAGAGTTT TGGAAGCATA AGATCGATAT GCATGCACGC GGATGGTGTA GATTGGATAT TGATGGCATT AGGCTTAATT GGAGCCGTCG GTGATGGCTT CATCACTCCT GTTGTAGTTT TTATCTTCAA CACGCTACTG AACAACCTTG GTACTTCCTC TTCCAATAAT CAAACCTTCA TGCAAACAAT CTCCAAGAAT GTTGTAGCTT TGCTTTACGT CGCTTGTGGA TCTTGGGTGA TATGTTTCCT TGAAGGATAT TGTTGGACAA GAACAGGGGA GAGACAAACA TCAAGAATGA GAGAAAAGTA CTTAAGGGCA GTGTTAAGAC AAGATGTGGG TTACTTTGAT CTTCATGTTA CAAGCACTTC TGATGTTATC ACCAGTGTCT CTAGTGACAG CCTCGTCATC CAAGACTTCC TCAGTGAAAA GTTACCAAAC TTTTTGATGA ATGCATCTGC GTTTGTCGCA AGCTATATAG TGGGTTTCAT CTTGCTATGG AGACTCACAA TCGTAGGTTT CCCATTCATC ATCCTCCTTT TGATCCCTGG ACTAATGTAT GGACGAGCCC TCGTTAGCAT CTCAAGGAAG ATTCGCGAGC AGTACAACGA CGCTGGTTCT ATAGCCGAGC AGGCTATCTC ATCAGTTCGA ACAATCTATG CATTTGGTAG TGAGAACAGA ATGATAGGGA AGTTCTCAAC TGCACTTAAA GGGTCGGTGA AGCTAGGGTT GAGACAAGGG CTAGCTAAAG GAATTGCTAT TGGGAGCAAT GGTGTCACTC ATGCTATTTG GGGATTCTTA ACTTGGTACG GAAGTCGGCT GGTTATGAAC CATGGCTCTA AAGGCGGTAC TGTCTTCGTA GTCATTAGTT GCATCACATA TGGCGGCATA CAACTTGGTC AGAGTTTATC AAATCTCAAA TATTTCTCAG AGGCATTTGT AGCATGGGAA CGAATTTTAG AAGTGATAAA AAGAGTCCCT GATATAGATT CAGAAAAATT GGAAGGTCAG ATTCTGGAGA GGATTGAAGG ATATGTGGAA TTCAACCACG TGAAGTTCAA CTACATGTCT AGACCTGAAA CCCCTATCTT TGACGATTTA TGTCTGAAAA TTCCATCAGG GAAAACTGTG GCTTTGGTGG GCGGAAGTGG ATCGGGAAAA TCGACCATTA TATCGCTTTT ACAGAGGTTC TATGACCCGA TCGCAGGAGA TATTCTCATT GATGGTGTGT CCATTAATAA GTTGCAAGTG AAATGGTTGA GATCACAAAT GGGTCTGGTT AGCCAAGAGC CAGTACTCTT TGCCACATCT ATAACAGAGA ACATATTATT TGGTAAAGAA GATGCATCGA TGGATGAAGT AGTGGAAGCT GCCAAAACCT CAAACGCTCA TACTTTTATT TCTGAGTTCC CTCTTGGTTA CAAAACTCAG GTCGGGGAGA GGGGAGTGCA AATGTCGGGA GGCCAGAAGC AAAGGATCGC AATTGCACGA GCGCTAATTA AATCACCAAT AATTCTCCTT CTAGACGAGG CAACAAGTGC TCTGGACTCC GAATCCGAAA GGGTAGTCCA AGAAGCCTTA GATAATATCT CTATTGGCCG TACTACTATC GTTATTGCCC ACCGCCTCTC TACTCTTCGT AATGCTGATG TTATCTGTGT AATCCAAAAT GGTCACATTG TCGAAACCGG GTCGCACGAA GAGCTCCTGG AGAGGATAGA TGGGCATTAC TCTTCGCTAG TCCGCTTACA ACAAATGAAG AATGAAGAAT CAGATGTTAA CATCAATGCA AGTGTGAAAA AGGGCAAAGT CTTGATTTTA AGCAACGACT TTAAGTATAG TCAACACAAC TCTCTTAGTA GCACAAGCTC AAGCATTGTT ACGAATCTTT CTCATTCGAT TCCTAACGAT AATAAGCCGC TTGTGCCATC ATTTAAGAGA TTGATGGCAA TGAATAGGCC AGAGTGGAAA CATGCATTAT GTGGTTGCTT AAGTGCAGCT TTATTTGGGA TCATACAACC AATTTCTGCA TATTCCGCGG GATCAGTGAT ATCAGTGTTT TTCCTAATGA GCCATGACGA GATCAAGGAG AAAACAAGGA TATATGTGTT GTTATTTGTT GGTTTAGCTA TATTCTCTTT CTTAGTCAAT ATTAGTCAAC ATTACAGTTT TGCATACATG GGTGAATACC TAACAAAGCG TATTCGAGAA CAAATGCTCT CAAAGATATT GACGTTTGAA GTCAATTGGT TCGATATAGA TGATAACTCA AGTGGTTCAA TTTGCTCCAG GCTAGCAAAA GATGCTAACG TGGTGAGATC AATGGTTGGT GATCGAATGT CATTGCTGGT ACAAACCATA TCGGCAGTGA GCGTAGCTTG CATAATTGGT TTGGTCATTG CTTGGCGATT AGCCATCGTG CTGATTTCAG TACAGCCACT AATTGTTGTC TGCTTCTACA CTCAACGTAT TCTGCTCAAG AGCTTTTCCG AAAAGGCCAC CAAAGCCCAA GATGAATGTA GTAAATTAGC CGCGGAGGCT GTATCAAACA TACGAACCAT CACAGCCTTC TCATCACAAG AACGGATCAT AAAACTACTA AAAAAGGTTC AAGAAGGTCC TCGTAAAGAA AGTGTCTACC AATCATGGTT AGCAGGGATT GTGTTGGGGA CTTCTAGAAG CCTTATAACG TGTACTTCGG CTTTGAATTT TTGGTATGGT AGTAGACTAA TCGCTGATAG GAAGATGGTG TCAAAAGCAT TCTTTGAGAT ATTTATGATC TTTGTGACTA CGGGTCGGGT TATTGCTGAT GCTGGAACCA TGACGACAGA TATAGCCAAG GGATTGGATG CAGTTGGGTC AGTGTTTGCA GTGTTAGATC GTTGTACGAC CATTGAGCCA GAGGACCCAA GTGGATACGT CCCCGAAAAA ATAAAAGGAC AAATTACATT TCTTAATGTG GACTTCTCTT ACCCAACACG ACCTGATGTG GTTATATTCG AGAACTTTTC CATTGAGATC GAGGAGGGGA AGTCAACAGC GATAGTAGGT CCAAGCGGGT CAGGTAAATC CACAATAATT GGCTTGATTG AGCGGTTCTA TGATCCGTTA AAAGGTATTG TGAAAATTGA TGGCCGCGAT ATAAGGTCGT ATCATCTAAG ATCGCTTCGT AAGTACATAT CTTTGGTTAG CCAAGAGCCA ATGTTATTCG CTGGGACGAT CCGAGAGAAC ATTATGTACG GAGGAACATC TGACAAGATC GACGAGTCGG AGATTATCGA GGCAGCAAGG GCAGCGAACG CTCATGATTT CATCACATCA CTATCTAACG GGTATGACAC AAACTGTGGA GACAAAGGAG TACAATTGTC TGGTGGTCAA AAACAGAGGA TCGCAATTGC TCGAGCAGTT TTGAAGAATC CATCGGTATT GCTCCTTGAT GAAGCTACTA GCGCTCTAGA TAGCAAATCA GAGCATGTGG TGCAGGACGC GCTTGAGCGT GTAATGGTTG GAAGGACGAG CATTATGATT GCACATAGGC TTAGCACAAT CCAAAACTGT GACATGATCG TTGTTTTAGA CAAAGGGAAA ATTATCGAAT GTGGTAACCA TTCTTCCTTG TTGGGAAAGG GTCCAACAGG CGCTTATTTC TCATTGGCCA GTATCCAGAG AACTCTCAGT TGAAAGTCAG ATGTGTATAA AATACTCT 
Length3768
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4309799.. 4312253
Download Sequence
A.thaliana
AGI-codeAT3G28380.1
DescriptionP-glycoprotein 17
TAIR curator summary
Alias[ABCB17][PGP17][ATP-binding cassette B17][P-glycoprotein 17]
Gene coexpression
MR
MR Locus Description
6.55744 Ahg351609 Protein of Unknown Function (DUF239)
8.48528 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
8.7178 Ahg917939 floral meristem identity control protein LEAFY (LFY)
8.94427 Ahg484914 transposable element gene
9.16515 Ahg921700 ENTH/VHS/GAT family protein
10.7703 Ahg925744
12.1244 Ahg475423 conserved peptide upstream open reading frame 45
12.2474 Ahg904884 RNA-binding protein
13.4164 Ahg929770 Protein kinase superfamily protein
14.4914 Ahg927998
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression