Detail



ID : Ahg937331

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937331|scaffold_501522.1
Sequence
AGAGTAAAAG AAGTGAAGCA ATGTCTCTGA TTCCGAGCAT TTTTGGAGGT CGAAGGACCA ACGTGTTCGA TCCATTGTCA CTCGACGTAT GGGATCCTTT TGAGGGATTC TTGACGTCAT CAGGTGTTGC AAACGCACCG GCTAAGGACG TGGCAGCGTT CACAAACGCT AAAGTGGATT GGAGGGAGAC ACCTGAGGCG CACGTGTTCA AGGCGGACTT GCCGGGGTTG AAGAAGGAAG AGGTGAAGGT GGAGGTTGAA GATGGCAATA TACTTCAGAT AAGCGGAGAG AGGAGTAGTG AGAGTGAAGA GAAGAGTGAC AAGTGGCACC GTGTGGAGAG GTCAAGTGGG AAGTTCATGA GGAGGTTTAG GTTGCCGGAG AATGCGAAGA TGGAAGAAGT GAAGGCGAGT ATGGAGAATG GTGTGTTGTC GGTTACGGTG CCGAAAGTGC CGGAGAAGAA GCCTGAGGTC AAGTCCATAG ATATCTCCGG TTAACAGGAG AAGTTGAATT TGAA 
Length514
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11901592.. 11902105
Download Sequence
A.thaliana
AGI-codeAT3G46230.1
Descriptionheat shock protein 17.4
TAIR curator summarymember of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds
Alias[ATHSP17.4][HSP17.4][ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.4][heat shock protein 17.4]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg337408 HSP20-like chaperones superfamily protein
6.9282 Ahg474482 HSP20-like chaperones superfamily protein
8.24621 Ahg490289 Bax inhibitor-1 family protein
9 Ahg488045 heat shock protein 17.6A
10.247 Ahg933278 EIN2 targeting protein2
10.583 Ahg488044 17.6 kDa class II heat shock protein
12 Ahg481866 HSP20-like chaperones superfamily protein
12.0416 Ahg485004 heat shock protein 17.4
12.6886 Ahg894458 Cytochrome bd ubiquinol oxidase, 14kDa subunit
14.9666 Ahg945273 heat shock protein 21
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression