| Annotation |
|---|
| Description | jgi|Araly1|937358|scaffold_501549.1 |
| Sequence |
AGACAGAGAA GAATCAATCA ATGGAGGAAG AGAAAGCTTC TGCTGCACAG AGCTTAATCG ATGTAGTTAA CGAGATTGCT ACGATTTCCG ATTATCGAAT TACGGTGAAG AAGCTTTGTT ATAATCTAGC GAGGAGATTG AAGCTGCTTG TTCCTATGTT TGAGGAAATT AAAGAGAGTA ACGAACCGAT CAACGAAGAT ACGTTGAGGA CTTTGGTGAA TTTGAAGGAA GCTATGTGTT CAGCGAAGGA TTTTCTCAAA TTTTGTAGCG AAGGGAGCAA GATTTATCTG GTGATGGAGA GGGAACAAGT GACAAGTAAA TTGATGGAGG TGTCTGTTAA GTTAGAACAA TCTTTGAGCC AGATTCCGTA TGAGGATCTC GATATATCGG ATGAAGTTAG AGAACAGGTT GAGCTGGTTC TCAGCCAGTT TCGGCGGGCT AAAGGAAGAG TAGATGTGTC AGACGATGAA CTATATGAAG ATCTTCAGTC GCTGTGCAAC AAAAGTAGTG ATGTAGATGC TTGTCAGCCT GCCCTGGAGC GGGTTGCGAA GAAGTTACAG TTGATGGAGA TTCCTGACCT AGCTCAAGAA TCAGTGGCTC TGCACGAAAT GGTTGCTTCG AGCGGTGGAG ACGCTGGTGA AAACATTGAG GAGATGGCAA TGGTACTAAA AAAGATTAAG GATTTTGTGC AGACGGAGGA TGACAATGGT GAGGAGCAGA AAGTAGGGGT TAACTCAAGA AACAATGGAC AAACTTCTAC GGCAGCGAGT CAGAAGATAC CCGTAATTCC TGATGATTTC CGTTGTCCGA TATCGCTGGA AATGATGAGA GATCCAGTTA TAGTTTCATC AGGGCAGACC TACGAACGAA CCTGTATTGA GAAGTGGATA GAAGGTGGAC ACTCGACATG TCCAAAAACA CAGCAGGCGC TAACAAGCAC AACCCTCACA CCAAACTATG TTCTCCGTAG TCTCATAGCT CAGTGGTGCG AGGCCAATGA TATCGAGCCT CCAAAGCCTC CGAGCAGTTT AAGACCCAGA AAAGTATCGT CATTCTCGTC CCCAGCAGAA GCAAACAAGA TTGAAGATCT TATGTGGAGA CTCGCTTATG GAAACCCTGA GGACCAACGA TCTGCAGCTG GAGAAATCCG CCTTCTTGCA AAACGAAATG CAGATAACCG TGTGGCTATT GCCGAAGCTG GAGCCATACC TCTTCTCGTA GGCCTCCTCT CAACTCCTGA TTCTCGTATC CAAGAACATT CAGTAACAGC TCTCCTAAAC CTCTCTATAT GTGAGAACAA CAAAGGAGCC ATTGTTTCTG CTGGAGCAAT TCCTGGTATA GTTCAAGTGC TCAAGAAAGG AAGCATGGAG GCCAGAGAGA ATGCGGCGGC CACACTGTTC AGTCTATCAG TGATTGATGA AAACAAAGTG ACTATCGGTG CATTAGGAGC AATTCCACCG CTCGTTGTAT TACTTAATGA AGGTACACAA AGAGGCAAGA AAGATGCTGC TACTGCACTC TTTAACCTCT GTATATACCA AGGAAACAAA GGAAAAGCCA TACGTGCAGG AGTGATTCCC ACATTGACTA GACTCTTGAC AGAGCCCGGA AGCGGAATGG TCGATGAGGC ACTCGCGATT TTGGCGATTC TCTCTAGCCA CCCCGAAGGG AAAGCAATCA TAGGATCCTC TGATGCAGTC CCAAGTCTGG TTGAGTTTAT CAGAACTGGC TCGCCTAGAA ACAGAGAAAA CGCAGCTGCG GTTCTAGTCC ACCTCTGTTC TGGAGACCCA CAACATCTTG TCGAAGCGCA GAAACTCGGC CTTATGGGTC CATTGATAGA TTTGGCTGGA AATGGGACGG ATAGAGGGAA ACGAAAAGCA GCTCAGTTGC TTGAACGCAT CAGCCGTCTC GCTGAACAGC AGAAGGAAAC GGCTCAGTCA CAATCCGAAG AAGAAGCTGA ACCAACAAAT TCAGTATCCA CCGCAGAAGC TGCAGATACT TAAAGATTGT CTTTGTTTTG GGTCCT |
| Length | 2026 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 12054181.. 12056929 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G46510.1 |
| Description | plant U-box 13 |
| TAIR curator summary | Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. |
| Alias | [ATPUB13][PUB13][ARABIDOPSIS THALIANA PLANT U-BOX 13][plant U-box 13] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.55744 |
Ahg486239 | sumo conjugation enzyme 1 |
| 7.34847 |
Ahg490337 | alpha/beta-Hydrolases superfamily protein |
| 7.93725 |
Ahg931886 | Calmodulin-binding protein |
| 8.94427 |
Ahg496629 | splicing factor, putative |
| 10.198 |
Ahg491768 | autoinhibited Ca(2+)-ATPase 10 |
| 10.9545 |
Ahg903021 | auxin transport protein (BIG) |
| 15.4919 |
Ahg946319 | Protein kinase superfamily protein |
| 15.8745 |
Ahg916997 | YELLOW STRIPE like 3 |
| 16.1245 |
Ahg494346 | disease resistance protein (TIR-NBS-LRR class) family |
| 16.3707 |
Ahg477442 | receptor-like protein kinase 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|