Detail



ID : Ahg494346

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494346|fgenesh2_kg.8__162__AT5G46260.1
Sequence
ATGGCTTCTT CATCTTCTTC TCGCAATTGG TTATATGATG TTTTCTTGAG CTTCAGAGGA GGAGACGTCC GCGTAACTTT CCGTAGCCAC TTTCTCAAAG AGCTCGATCG CAAACTGATC ACTGCTTTCA GAGACAATGA GATCGAGAGA AGCCACTCTC TATGGCCCGA TCTTGAACAA GCGATCAAGG AGTCCAGGAT CGCTGTGGTC CTTTTCTCCA AAAACTATGC TTCATCAAGC TGGTGTCTTA ACGAGTTGCT GGAGATTGTG AATTGCAAGG ATAAAATTGT CATACCGGTT TTCTACGGTG TGGATCCTTC TCAAGTGAGG CATCAAATCG GTGACTTTGG AAGTATCTTT GAAAAGACTT GCAGGAGACA TTCAGAGGAA GTGAAAAATC AATGGAAGAA AGCGTTGAAT GATGTAGCTA ATATGCTTGG ATTTGACTCT GCGACCTGGG ATGACGAAGC AAAAATGATC GAAGAAATAG CCAATGATGT TTTGGGTAAA CTGCTTTTAA CTACACCCAA GGATTTTGTA AATTTTGTTG GCATCGAAGA TCATATTGCA AATATGAGTG GATTGTTGCA ACTGGAGTCT GAGGAAGTGA GAATGGTTGG TATATGGGGT TCCTCAGGGA TTGGTAAGAC TACCATCGCA AGAGCTCTGT TTAACCAACT TTCTCGTAAT TTCCAAGTTA GCAAATTCAT AGACAGAGCT TTTGTATATA AGAGTAGAGA AATCTATAGT GGAGCCAATC CGGATGACCA CAACATGAAG TTACATTTAC AAGAGAGCTT CCTCTCTGAA ATTCTGAGGA TGCCGGACAT AAAGATCGAT CATCTAGGTG TACTAGGAGA GAGGCTACAA CACCAGAAAG TTCTTATCAT CGTTGATGAT TTGGATGACC AAGTGATCTT AGATTCCTTG GTGGGTCAAA CTCAATGGTT TGGAAGTGGG AGTAGAATCA TTGTGGTTAC AAATGATATG CAATTCTTAA GAGCTCATGG GATTGATCAT ATTTATGAAG TTAGTCTCCC AACTGAAGAG CACGCTCTTG CAATGTTATG TCAATCTGCT TTCAGGAAAA AATCTCCACC TGAAGGTTTT GAGATGCTTG TAGGTCAAGT TGCAAAACAT GCGGGTAGTC TTCCTTTGGG TCTTAATGTT TTGGGTTCGT GTTTGAGGGG GAGGGATAAG GAGTACTGGG TGGATATGCT GCCTCGGCTT CAGAATGGTC TAGACGATAA AATTGAGAAA ATACTAAGAA TCAGCTATGA TGGGTTAGGT AGCGCAGAAG ATCAAGCGAT ATTTCGTCAT ATCGCATGTA TTTTCAATCA TATGGATGTC ACAACCATCA AGTCGTTGCT CGCAGATAGT AAATTGGGTG TTAATGTTGG GCTGAAAAAC CTAGTTGATA AATCCATCAT TCATGTCAGA TGGGGTCATG TGGAGATGCA TCGTTTGCTA CAAGAAATGG GCCAAAATAT TGTTCGCACA CAGTCCATTG ACAAGCTTGG AAAACGAGAA TTTCTGGTGG ATCCAAATGA TATTTGTGAT GTACTCAGTG AAGGCATTGA TACTCGAAAG GTTTTAGGTA TATCATTGGA GACAAGTAAG ATTGATCAGT TGTGTGTACA TAAGAGTGCC TTCAAACGGA TGCGTAATCT CCGTTTCTTA AAAATTGGTA CGAATATCTT TGGAGAAGAA AACAGATTGG ACTTACCTGA AAGTTTCGAC TATTTGCCCC CTACACTCAA ACTATTGTGC TGGTCTGAAT TCCCAATGAG GTGTATGCCG TCTAATTTCC GTCCTGAAAA CCTTGTCAAG CTCAAAATGC CGAATAGCAA GCTACATAAG TTGTGGGATG GAGTTGTGCC ACTTACATGT CTAAAGGAAA TGGATCTAGA TGGATCAGTC AACCTGAAAG AAATTCCTGA TCTTTCCATG GCAACTAATC TTGAGACACT TGAGCTTGGG AATTGCAAGA GTTTGGTGGA GCTTCCTTCC TTTATACGAA ATCTCAACAA ACTGTTGAAA TTGAACATGG AATTCTGCAA CAATCTGAAA ACTCTTCCAA CTGGCTTCAA CCTCAAATCT CTTGGCCTCC TCAACTTCCG ATATTGCTCG GAGTTGAGGA CTTTTCCCGA AATCTCAACC AACATCTCAG ATCTCTATCT GACTGGAACA AACATTGAAG AACTCCCTTC TAATTTACAT CTCGAGAATC TTGTTGAGCT TAGTATATCA AAAGAAGAGA GTGATGGGAA ACAATGGGAA GGAGCCAAGC CGCTTACGCC CTTACTGGCG ATGTTGTCTC CCACTTTGAC GAGCTTGCAT CTCCAAAATA TCCCAAGTTT GGTGGAGCTT CCTTCTTCAT TTCAGAATCT CAATAATCTG GAGTCTTTGG AAATCACAAA CTGCAGAAAT CTGGAGACTC TACCCACCGG AATCAACCTC CAATCTCTCG ATAGCCTTAG TTTCAAGGGA TGCTCACGCT TGAGAAGCTT TCCTGAAATC TCAACCAACA TCTCAAGTCT CAATCTAGAC GAAACAGGGA TTGAAAAGGT TCCTTGGTGG ATCGAGAACT TCTCTAACCT TGGTTTGCTA AGTATGGATC GTTGCAGCAG GCTAAAATGT GTATCCCTAC ACATTTCTAA ACTGAAACAT CTTGGGAAAG TTGACTTTAA AGATTGTGGG GAGTTGACTA GAGTTGATTT GAGTGGCTAT CCAAGTGGGA TGGAGGAGAT GGAAGCTGTC AAGATTGACG CAGTTTCCAA AGTCAAACTC GATTTCAGGG ACTGCTTCAA TTTGGATCCA GAAACTGTCC TTCACCAAGA ATCAATTATT TTCAAATACA TGTTATTTCC AGGGGAAGAA GTGCCATCAT ATTTCACTTA CCGTACTACT GGAGTCTCCT CTCTGACTAT TCCTCTACTT CCCACACATC TCTCCCAACC ATTCTTCAGA TTTAGGGTTG GCGCAGTGGT AACTAATGTA ATACATGGAA AAAATATGGA GGTGAAATGT GAGTTCAAAA ACAGATTTGG GAACAGCTTT CATGTTAGCT CTGATTTCTA TGTTTATTTA CTTTTTACGA AAAGTCAGAA GGGTAGTCAA ATGTTAATTA TATTGGAATG TTGTATCCCT CTAAACGAAG GTAATGCTCC TCTAGCTCAA GGGAACTACG ATCACGTGGT TATGGATATC CATATAAGAG CTGGAGGTTG GAGATCTACG TTCGAATTAA AAGAATGGGG TATACGACTG TTAAAGGACT GTTCATCAGC AGAGAACCGA CTTGGTAATC CAAACAGTAC TCTTCCGCAT TTTTCGGAAG CCGAAGAAGG CAATATTGGG TATACACCTC TTCAAGGACT TGTTAATGAG ATTGAACACA GTGAAGAGTC TGTAGATAAC GATGTAGAGA CAGAGAGAAG CACGAAGCGA ATGCGGATAA CTCGATTTGT TTTAAGACAA GAAACCTATG ACTTGCCCTA CCGCTATACC TAG 
Length3513
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1061407.. 1065365
Download Sequence
A.thaliana
AGI-codeAT5G46260.1
Descriptiondisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg931886 Calmodulin-binding protein
6.7082 Ahg496313 small G protein family protein / RhoGAP family protein
7.54983 Ahg926973 VPS35 homolog B
9.43398 Ahg490337 alpha/beta-Hydrolases superfamily protein
16.0624 Ahg328525 KNOTTED1-like homeobox gene 5
16.1245 Ahg937358 plant U-box 13
16.7332 Ahg312180 eukaryotic translation initiation factor-related
17.4356 Ahg489168 Zinc finger, C3HC4 type (RING finger) family protein
17.72 Ahg487314 RING/U-box superfamily protein
18.5472 Ahg490608 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression