Detail



ID : Ahg946319

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946319|scaffold_702548.1
Sequence
CTCTCTGTGT CTCTATAGCC ATGGCTGATG ATAAGGAGAT GCCTGCTGCT GTAGTTGATG GACATGATCA AGTCACTGGT CATATAATTT CCACCACAAT CGGTGGCAAA AATGGTGAAC CAAAACAGAC TATTAGTTAC ATGGCGGAGC GAGTTGTTGG TACAGGCTCG TTCGGAATCG TTTTCCAAGC AAAATGTTTG GAGACTGGAG AAACCGTGGC GATAAAGAAG GTTTTGCAAG ACAGAAGATA CAAGAACCGA GAACTTCAGT TGATGCGTGT GATGGATCAT CCGAATGTGG TTTGTTTGAA GCATTGCTTC TTTTCGACAA CAAGTAAAGA CGAGCTTTTC CTGAATTTGG TTATGGAGTA TGTTCCTGAG AGCTTGTATC GAGTTCTGAA ACACTATAGC AGTGCTAACC AAAGAATGCC TCTTGTCTAT GTTAAACTTT ACATGTACCA GATCTTCCGG GGGCTTGCTT ACATTCACAA TGTTGCTGGA GTTTGTCACA GAGATCTAAA GCCTCAAAAT CTTCTGGTTG ATCCTCTTAC TCACCAAGTC AAGATCTGTG ACTTTGGCAG TGCGAAACAG CTCGTTAAAG GTGAAGCCAA TATTTCTTAC ATCTGTTCAC GATTCTACCG TGCACCTGAG CTCATATTTG GTGCCACTGA GTACACAACT TCTATTGATA TCTGGTCTGC TGGTTGTGTT CTTGCCGAGC TTCTTCTCGG TCAGCCATTA TTTCCCGGAG AAAATGCTGT GGATCAGCTC GTTGAAATAA TAAAAGTTCT TGGTACACCA ACTCGAGAAG AAATACGTTG TATGAATCCA CATTACACAG ATTTCAGGTT TCCACAGATA AAGGCACATC CGTGGCACAA GATCTTCCAC AAAAGGATGC CTCCAGAAGC TATTGATTTT GCATCGAGGC TGCTTCAATA CTCTCCAAGT CTTAGATGCA CAGCACTCGA AGCTTGTGCC CATCCGTTCT TTGATGAACT GAGAGAACCA AACGCTCGTT TACCAAATGG ACGGCCTTTC CCGCCTCTCT TCAACTTCAA ACAAGAAGTA GCTGGAGCAT CACCTGAACT GGTCAACAAG TTGATTCCAG ACCATATCAA GAGACAATTG GGTCTAAGTT TCTTGAATCA ATCTGGAACA TAAAAGGATT CTGCAAAAGA CAAC 
Length1184
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9932123.. 9934601
Download Sequence
A.thaliana
AGI-codeAT4G18710.1
DescriptionProtein kinase superfamily protein
TAIR curator summaryATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus.
Alias[ATSK21][BIN2][DWF12][SK21][UCU1][SHAGGY-LIKE KINASE 21][BRASSINOSTEROID-INSENSITIVE 2][DWARF 12][ULTRACURVATA 1]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg935279 IQ-domain 14
2.44949 Ahg485507 Malectin/receptor-like protein kinase family protein
11.3137 Ahg943915 Leucine-rich receptor-like protein kinase family protein
12 Ahg358984 NSP (nuclear shuttle protein)-interacting GTPase
14.9666 Ahg479491 P-loop containing nucleoside triphosphate hydrolases superfamily protein
15.4919 Ahg937358 plant U-box 13
16.6132 Ahg312852
17.3205 Ahg471053 phytochrome A
17.6068 Ahg482666 glucan synthase-like 8
20.445 Ahg495516 ARF-GAP domain 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression