Detail



ID : Ahg937776

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937776|scaffold_501967.1
Sequence
TTTTCGTTCT ATACTGACGA AATGCCAAGC ATTAGAGCTC CAGCTGCGAA GAAGACCACT ACACTCACGG TCGCTGTGAA ATGTAGACCG TTAATGGAGA AAGAACGTGG TAGAGACATT GTTCGAGTGA ATAACTCTAA GGAAGTGATT GTGCTAGACC CTGACTTATC CAAAGATTAT CTTGACCGAA TTCAGAATCG GACAAAAGAG AAGAAATATT GTTTTGATCA TGCATTTGGT CCTGAGAGCA CGAACAAGAA TGTATATAGG AGTATGTCTT CTGTGATCTC TAGTGTTGTT CATGGACTCA ATGCTACAGT GTTTGCCTAT GGTTCCACTG GAAGTGGCAA AACATATACA ATGGTTGGAA CACGAAGTGA TCCTGGATTG ATGGTTCTCA GCCTGAATAC CATTTTTGAT ATGATCAAGA GTGACAAGAG CTCAGATGAG TTTGAAGTGA CTTGCTCATA TCTGGAAGTC TACAATGAAG TTATATACGA TCTGCTTGAA AAATCATCTG GTCATTTGGA GCTCAGAGAG GATCCAGAGC AGGGGATAGT AGTTGCTGGC CTGCGATCAA TCAAGGTCTA TTCTGCTGAT CGGATTCTTG AACTGCTGAA CTTAGGGAAC AGTAGACGAA AAACTGAGAG TACAGAGATG AATGGAACGT CATCAAGATC CCATGCAGTT CTGGAGATTG CAGTAAAAAG AAGGCAAAAG AATCAAAATC AAGTCATGAG AGGGAAACTC GCCCTTGTAG ATCTTGCTGG CAGTGAAAGG GCTGCTGAGA CGAACAACGG AGGTCAAAAA CTAAGGGATG GAGCCAATAT TAATCGCTCA CTCCTTGCAC TAGCAAATTG CATAAATGCT TTGGGGAAGC AACACAAGAA GGGTCTTGCT TATGTCCCAT ACAGAAACAG CAAACTTACG CGGATTCTTA AAGATGGTCT GAGTGGGAAC TCCCAGACAG TGATGGTTGC AACTATATCA CCTGCTGATA GTCAGTACCA TCATACTGTG AACACCTTGA AATATGCTGA CCGGGCTAAA GAGATTAAGA CACACATTCA GAAAAATATT GGTACCATCG ACACTCATAT GTCAGACTAC CAACGAATGA TAGACAATCT TCAAAGTGAG GTTTCTCAGC TGAAGAAACA GCTAGCAGAA AAGGAGTCAC AGCTAAGTAT CAAACCTTTT GAAAGAGGTG TTGAACGTGA ACTTTCGTGG TTGGATGGTT TAAGCCACCA GATCAGTGAA AATGTTCAAG ACCGTATAAA CTTACAGAAG GCTTTATTTG AGCTTGAGGA AACTAACCTG AGAAATCGCA CTGAACTTCA GCATCTCGAT GATGCAATTG CGAAACAGGC GACAGAGAAA GATGTTGTCG AAGCTTTAAG TAGCAGACGA CAAGTTATAC TTGATAATAT CCGCGACAAT GATGAAGCCG GTGTTAACTA CCAGAGAGAT ATTGAAGAAA ATGAAAAACA TCGTTGCGAA CTACAGGATA TGCTCAATGA AGCAATAAAT AACAACGGAA ACAAAACTTA TCTGCATATT CTTAATCAGT ATAAGCTCCT GGGGATGGGT AATACGGAAC TACAGTTTGA AATGGCAATG AGGGACCAAA TCATTTACAA CCAAAGGGAA GCCCAGAGAA ACCTATGGAA TTTGCTCATG GGTTTAGGAG TTGAAGAGAA ACAAGTGTTC GATCTCGCTG CAAAACAAGG AATCACAATC GAAGACTGGA GTAGTATGGC GTCATTTCCA GGACTTCCTT ACCGGAAACA GACACCGAGT TTCATACCTG CAAACATCCC TTTCGTGGGA CACTCATATT CTAAATCCTC ATGCACGTTC CAGAGCTATC AAGACCCTTC TTCGAAAGGA CAACAATGGG CTCCAACTCC TACTTTATGC AGAGAGGAAC ACCACAGCTC TTACTACTTC ATGGGACGGG AGCCACCTGC ATTTGTCAAT CTTAGGAAAA GCCACGATGG TTGGGTTGGT GGTAGCAGAC CAGCTTCACG GATCGACACA GGAGGCAATC ATCGCCGAGT CTCATATCCA CAAACTGTGA ACAATTCTTC TCCTCGGATG GCCCCTTCGC ATTTGGGTCC GACTTTTTAC CAGACTCCTC AAAGGGAAAT GTTGGTCAAC ACAACGAGTC CTTATAGTAG CCCGCGAGCA GGACTCATCA ACGGGGCCAC CACTCCGTCC GTGCAACCTT TCTATGGAAG TCCTCGTGCC GTCACCGTGA GAAACGGTTC ATACAACAAT CCACGCGCCC CCACTGCAGT TTCATCCAAT GGTGCTAGAA ACCAACAACG AGTGTTTGGA ACGAGCCCAC TCGCAGGAAC CAAAGGCGTC AAGAACTCTT CGTATGGACA GAACAGCGCC ACAAAGTTGT ACAGAGGAGG AGGAGGAGGA GGCACTAAAG GGCACAATAA AGGAAACAAA ACTCAACGCC AACACCAATG ACATGAGACC AAAACATGGG T 
Length2501
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13883878.. 13888077
Download Sequence
A.thaliana
AGI-codeAT3G49650.1
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
34.7275 Ahg473380 Tetratricopeptide repeat (TPR)-like superfamily protein
35.0286 Ahg471076 Eukaryotic aspartyl protease family protein
46 Ahg478745 O-Glycosyl hydrolases family 17 protein
46.0435 Ahg477980 aldehyde dehydrogenase 22A1
46.6369 Ahg952368 Leucine-rich repeat protein kinase family protein
49.7494 Ahg924525 6-phosphogluconate dehydrogenase family protein
61.8061 Ahg487981 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
65.2074 Ahg945085 O-Glycosyl hydrolases family 17 protein
68.374 Ahg910727 branched-chain amino acid transaminase 1
74.135 Ahg482092 Stress responsive alpha-beta barrel domain protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression