Detail



ID : Ahg473380

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473380|fgenesh2_kg.1__3334__AT1G31920.1
Sequence
ACTTGTGGCT CTTATTTTCC ATGAAAATCT CGAGGGATGA GATTCAAAAC CCCTCAAATC TTTCTTACAT TTTCGGACAC CAAATCCCTA GTTTCTTAAT GGTTACGAGG AGAGGATGAT CAAGGCACCA ACAATTCTAC AGTCTCTATT GGCTTCTAGA GACGATTTAA CACATAACCC AGAAGTCAAC AACTGTGGAG GGAAAGAGCA AGAATGTTTA TACCTCTTGA AGAGATGCAA CAACATTGAC GAGTTCAAGC AAGTTCACGC CAGATTCATC AAGCTAAGTT TGTTCTGCTC TTCTTCATTC TCAGCTAGCA GCGTTCTCGC AAAATGCACT CACTCGAGGT GGGAGAACAG TATGAATTAC GCAGCTTCGA TATTCAGAGG CATTGATGAT CCGTGTACCT TTGATTTCAA TACAATGATT AGAGGGTATG TTAATGAAAT GAGTTTCGAG GTAGCATTGT GTTTTTACAA TGAGATGATG GAGAGAGGGA TTGAGTCAGA TAATTTCACG TACCCGTGTC TTCTCAAGGC TTGCACTCGT TTGAAGGCGA TTCGAGAAGG GAAGCAGATT CATGGGCACG TGTTTAAGCT CGGTCTTGAA GCGGATGTGT TTGTTCAGAA TAGTTTGATC AATATGTATG GAAGATGTGG AGAGATGGAA CTTTCTTCTA CAGTTTTTGA GAAACTGGAA TTTAAATCTG CTGCGTCGTG GAGCTCAATG GTTTCAGCTT GTGTAGGCAT GGGATTGTGG AGCGAATGCT TGATGTTATT TCGTGAAATG TGTAGAGAAA CGAATTTGAA GGCTGAGGAA AGCGGAATGG TTAGTGCTCT CTCAGCTTGT GCCAACACAG GTGCACTCAA TCTAGGAATG AGCATCCATG GCTTCCTGTT GAGAAACATA AGCGAACTCA ACATAATAGT CCAAACTTCA CTTGTAGATA TGTACGTTAA ATGCGGGTGT ATAGACAAAG CGTTGCATAT ATTTCAGAAG ATGGAAAAGA GGAATAATTT GACTTACAGT GCAATGATCT CAGGACTTGC GTTGCACGGA GAAGGAGAAT CAGCTTTAAG AATGTTCTCT GAGATGATCA AAGAAGGCTT AGAACCAGAT CATGTTGTGT ATGTCAGTGT TCTCAATGCC TGTAGCCACT CTGGTCTTGT TAAAGAAGGT CGTCGAGTCT TCGAAGAAAT GTTAAAGGAA GGTAAGGTGG AGCCAACGGC TGAGCATTAT GGCTGTCTTG TAGATCTTCT GGGAAGAGCC GGATTGCTCG AGGAAGCATT GGAGACTATC CAAAGCATGT CCATTGAGCA AAATGATGTT GTCTGGAGAA GCTTCTTAAG CCAATGCAGA GTTCATCAGA ACATTGAGCT AGGTCAAATA GCAGCTCAAG AACTGCTTAA GCTAAGCTCA CACAACCCAG GTGACTATTT GCTAATCTCT AACATGTATT CACAAGCTCA AATGTGGGAT GATGTAGCCA GAGCTCGAAC AGAAATCGCT ATCAAGGGTT TGAAGCAAAC CCCGGGTTTT AGTATTGTCG AGGTAAAAGG TAAAACCCAC AGGTTTGTTT CACAAGATCG ATCGCACCCA CAATGCAAAG AAATCTACAA GATGCTACAC CAGATGGAAT GGCAACTAAA GTTCGAAGGA TATTCACCAG ACTTGACACA GATATTGCTA AACGTAGATG AAGAAGAAAA GAAAGAGAGA CTAAAAGGAC ACAGCCAAAA GGTGGCTATT GCCTTTGCAC TATTGTATAC ACCTCCAGGG TCTATCATTA AAATAGCTAG AAACCTGAGG ATGTGTAGTG ACTGTCACAC ATATACAAAG AAAATCTCCA TGATCTACGA AAGAGAGATT GTTGTAAGAG ACAGAAATAG GTTTCACCTG TTTAAAGGTG GAACTTGTTC TTGTAAAGAT TATTGGTAGG TTTAAATC 
Length1948
Protein Sequence
Protein Residue
Map Locationscaffold_1: 13769031.. 13771005
Download Sequence
A.thaliana
AGI-codeAT1G31920.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.6886 Ahg473392 early-responsive to dehydration stress protein (ERD4)
21.4942 Ahg930074 proton gradient regulation 7
25.9037 Ahg475890 alpha-fucosidase 1
34.7275 Ahg937776 P-loop containing nucleoside triphosphate hydrolases superfamily protein
38.8844 Ahg924996 Pectin lyase-like superfamily protein
43.4166 Ahg476070 DHHC-type zinc finger family protein
44 Ahg920316 phytochrome kinase substrate 2
46.1952 Ahg486409 crinkly4
46.9894 Ahg940652 Glycosyl hydrolases family 31 protein
59.7997 Ahg472578 Plant invertase/pectin methylesterase inhibitor superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression