Detail



ID : Ahg937994

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937994|scaffold_502185.1
Sequence
GAGAAGCTCT GAGAGCGAAG TCATGGTTGT TGCACGCCAT GTGTTTGTGT TATTGTCTCT GTTAGTGGTG GGCTTTTGGG GTTTGGAGAG ATGTGAGGCT TCTGGGAAGT TTAGCTTCGA AGTTCACCAC ATGTTCTCTG ATAGAGTCAA GCAAACTCTT GGGCTTGACG ATCTAGTTCC GGAAAAAGGA AGTTTGGAGT ACTTCAAGGT TTTGGCACGG CGTGATCGGT TGATCAGAGG TCGAGGTCTT GCCTCCAACA ATGAAGAAAC CCCTATTACT TTCATGCGGG GAAATCGCAC GGTTTCAATC AACCTTCTGG GATTCCTGCA CTACGCCAAT GTTTCTGTGG GGACACCGGC CACTTGGTTC CTGGTGGCTC TGGACACCGG CAGCAATTTG TTTTGGTTAC CTTGCAATTG CGGTTCCACT TGTATCCGCG ACTTAAAAGA CATTGGACTT TCACAGAGTC GACCACTCAA TCTATACAGC CCCAACACAT CTTCTACAAG TTCAAGCATT AGATGCAATG ATGACCGTTG TTTTGGGTCG AGTCAGTGTT CTTCTCCTGC AAGTAGTTGC CCTTATCAGA TCCAGTACCT TTCTAAGGAC ACCTTCACCA CCGGGACATT GTTTGAGGAC GTATTGCATT TGGTCACAGA GGACGTGGAT TTAGAGCCTG TTAAAGCTAA TATCACGCTT GGTTGCGGTC AAAATCAGAC AGGTTTTCTC CAGAGTAGTG CGGCTATTAA TGGTCTTCTC GGGCTAGGTA TGAAAGATTA CTCTGTTCCG AGCATACTTG CAAAAGCTAA AATCACTGCA AACTCTTTCT CAATGTGTTT TGGGAATATC ATTGACGTTA TCGGAAGAAT CAGCTTCGGA GACAGAGGCT ACACAGACCA GATGGAGACG CCACTACTTC CTACCGAACC AAGTCCGACA TATGCTGTGA ATGTGACTGA AGTATCCGTG GGGGGAGATG TTGTTGGGCT TCAGCTGCTA GCTCTCTTCG ACACTGGAAC ATCATTTACA CATTTACTAG AGCCAGAATA TGGTCTTATT ACCAAAGCTT TTGACGATCA TGTCACTGAC AAGCGACGTC CGATTGATCC TGAGATTCCA TTTGAGTTCT GTTACGACTT AAGTCCAAAC ACTACAATCA TTTTATTCCC CAGAGTAGTG TTGACTTTTG AAGGAGGATC CCTAATGATT CTGAGAAACC CGCTTTTCAC AGTGTGGAAT GAGAACAATA CCGCCATGTA CTGCTTGGGT ATTCTGAAGA GCGTGGATTT CAAGATTAAC ATTATCGGAC AAAACTTCAT GTCGGGCTAC CGCATTGTAT TTGACAGGGA GAGGATGATT TTGGGTTGGA AGCGGTCTGA TTGTTTTGAA GATGAAAGCT TAGCATCACA GCCTCCTCCA CCACCAGAGA CTGAAGCTCC TGCACCAAGT GTATCCGCTC CACTACCTAG TCATCCTCCT CTTGCTGCTG CTGCTACACC GCCCCCAATA GACGCTCGTA ACTCCACCAG AAACTCTGGC ACAGGCACTG CAGCCAATCT CATCCCTCTC GCATCTCAAC TCCTACTTCT CATACCTCTT TTGGCCTTTC TCTGATTCAT TTTGTGTTGG TTTGA 
Length1635
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14728755.. 14731813
Download Sequence
A.thaliana
AGI-codeAT3G51330.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.247 Ahg471506 Protein of unknown function (DUF1262)
10.5357 Ahg492857 VACUOLAR SORTING RECEPTOR 7
13.4164 Ahg479752 PLAT/LH2 domain-containing lipoxygenase family protein
19.1833 Ahg900074 Protein of Unknown Function (DUF239)
19.6977 Ahg941373 Plant protein of unknown function (DUF946)
21.7715 Ahg942355 carbon/nitrogen insensitive 1
24.2487 Ahg493466 XB3 ortholog 4 in Arabidopsis thaliana
28.1425 Ahg895387 Protein kinase superfamily protein
32.1714 Ahg909050 alpha/beta-Hydrolases superfamily protein
33.0454 Ahg935612 cyclic nucleotide-gated channel 12
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression