Detail


ID : Ahg938312

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938312|scaffold_502503.1
Sequence
GACTCTGGAA TTGATCGGCG ATGGCGGTGG GCGATCAGAC AGAGCAGACT TACTTACCGA AGAAGAAGAA ATCCGAAACG GAAGACGATA AGAGGAGGAA GAAAATTGTT CCTGGGAGCT TGTTGAAAGC TGTGGTGAGA CCTGGAGGAG GTGATTCGAG CCCTGTTGAT GGTGATCAGG TTATTTATCA CTGCACTGTA CGGACACTGG ATGGTGTAGT TGTGGAATCT ACGAGGTCAG AATGTGGAGG GAGAGGTTTA CCGATAAGAG ATGTCCTGGG GAAGAGTAAA ATGATCCTTG GATTGCTCGA AGGTATTCCC ACGATGCACA AGGGTGAAAT TGCAATGTTC AAGATGAAAC CTGAAATGCA TTATGCAGAG AATGATTGTC CTGTTTCAGC TCCAGGCAAT TTTCCAAAAG ATGACGAGCT TCATTTTGAG GTTGAGTTGT TGGATATTTC TAAAGCCAAG ATTGCAAGTG ATGATCTGGG GGTCATCAAG AAGATTCTAA ATGAAGGTGA GGGCTGGGAA TCTCCCAGAG AACCCTATGA AGTAAAAGCT AGAATATCTG CTAAATCCGG TGATGGACAA GTGATCTTCT CTTATGCAGA AGAACCTTAT TTCTTCACAT TTGGAAAATC TGAGGTGCCT AAAGGTCTTG AAATCGGAAT TGGAACCATG GCTCGGAAGG AGAAGGCAGT GATATATGTT CGCAAGCAGT ACTTGACTGA ATCTCCTTTG TTGCATATAG ATCAGGACCT TGAGGAAGTT CATTTTGAGG TTGAACTGGT ACATTTCATT CAGGTGCGGG ACATGCTTGG AGATGGACGT CTCATAAAAC GTCGAGTTCG AGATGGAAGA GGCGAGTTTC CAATGGATTG TCCTCTCCAA GATAGTCGGT TAAGCGTTCA CTACAAGGGC ATGCTTCTCA ATGAAGAGAA AACTGTCTTC TATGATAGCA AGATTGACAA TAATGATCAA CCGTTGGAGT TCAGTTCAGG AGAAGGACTG GTCCCTGAGG GGTTTGAGAT GTGTACTCGT TTGATGCTAC CTGGGGAGAT TGCTCTTGTT ACATGCCCCC CTGATTATGC ATATGACAAA TTTCCGAGAC CACCTGGCGT GTCTGAAGGT GCACATGTTC AGTGGGAGAT TGAACTCCTT GGTTTTGAAA CGCCAAGGGA CTGGACTGGC TTGAACTTCC AGAGCATCAT GGACGAGGCA GATAAAATCA GAAGCACGGG TAACAGGCTT TTCAAAGAAG GAAAATTTGA GCTCGCAAAA GCAAAGTACG AAAAGGTGCT CCGGGAATTT AATCATGTCA ACCCACAAGA TGAAGATGAA GGAAAAATAT TTGGTGACAC AAGGAATATG TTACATCTGA ATGTTGCTGC TTGCTTGCTT AAAATGGGAG AGTGGAGGAA ATCTATAGAG ACATGCAATA AGGTCCTAGA AGCAAAGCCT GGTCATGTGA AAGGTCTCTA CCGCCGCGGA ATGGCTTACA TTGCTGGTGG AGAGTATGAT GACGCTAGAA ATGACTTCAA TATGATGATC AAAGTGGATA AATCATCAGA AGCTGATGCG ACCGCTGCTC TATTGAAACT GAAGCAGAAG GAACAGCGCG CCCCCNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNCGATA GAAGAAGTAG ATGAGACAAA GGATAATGAT GATGATGAAA CACAGGAAGA AGAAGGAACT ACGACAGTGA GCACGGAAAG GAAGAGGAAA TGGTCGGAGA AAGCCTGGCC ATTTCTGAAG AACGTGATGC TCCAAATCGG AATCCAGCTC GGTGTTGTCC TGTTAGGGAT TTTGATTTTT CAGTTTGTGG GCGCCAAATT TACATGAGAG AGCTATGAAT AAACAACC
Length1958
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15901327.. 15905038
Download Sequence
A.thaliana
AGI-codeAT3G54010.1
DescriptionFKBP-type peptidyl-prolyl cis-trans isomerase family protein
TAIR curator summaryImmunophilin-like protein similar to the p59 FK506-binding protein (FKBP52). Shows rotamase activity and contains an FKBP-like domain and three tetratricopeptide repeat units. Members of this class of mutation show ectopic cell proliferation in cotyledons. Gene may be alternatively spliced.
Alias[DEI1][PAS1][PASTICCINO 1]
Gene coexpression
MR
MR Locus Description
17 Ahg476534 TBP-associated factor 2
19.3649 Ahg484301 phosphoinositide 4-kinase gamma 7
21.0713 Ahg481806 CAX interacting protein 4
25.04 Ahg937188 conserved peptide upstream open reading frame 61
25.671 Ahg488799 Aluminium induced protein with YGL and LRDR motifs
27.1662 Ahg328082 LIM domain-containing protein
32.0624 Ahg484422 Tetratricopeptide repeat (TPR)-like superfamily protein
39.4588 Ahg314946
40.3733 Ahg323209 Cysteine proteinases superfamily protein
43.2666 Ahg351139 chromatin remodeling 42
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression