| Annotation |
|---|
| Description | jgi|Araly1|351139|fgenesh1_pg.C_scaffold_6001732 |
| Sequence |
ATGAAGAAGA GAGGTTTCTA CAATTTGAAG CATCCATTTG ATCCATGCCC TTTTGAGTTC TTCTGCTCGG GTACATGGAA GCCTGTGGAA TACATGAGGA TCGAAGATGG AATGATGACA ATACGTCTGT TACAGAACGG TTATGTGTTG GAGGATATCC GTCCCTTCCA AAGGCTTCGT CTCAGATCAA GAAAAGCGGC TTTGAGTGAC TGTATCTGTT TCCTTCGCCC TGATATCGAT GTCTGTGTTC TCTATCGTCT CCATGAGGAT GACTTGGAAC CGGTTTGGGT CGATGCGAGG ATTGTTTCTA TAGAGAGGAA GCCTCATGAT TCTGAATGCT CTTGCAAGAT CAGTGTTAGA ATTTACATTG ACCAAGGCTG CATTGGGTCG GAGAAACAGA GAATCAATAA AGATGCCGTG CTTATCGGTC TAAACCAAAT CTCTATTCTC CAGAAGTTCT ACAAGGAACA AAGTACTGAT CAGTTTTACA GGTGGAAATT CTCTGAGGAC TGCACTTCCT TGATGAAAAC GAGACTGTCG TTGGGAAAGT TCTTGCCGGA TCTTTCGTGG TTGACTGTTA CTTCAATTCT GAAAAGCATT GTGTTTCACA TAAGAACAGT GCAAACCAAG ATGATTTATC AGATTGTAGC AGATGAAGGC TCTAGCTGTA CGTTGAGTTC GATGAATATA ACTGTGGAAG ACGGTGTTTC GTTATCAAAA GTTGTTCAGT TTAATCCTGC AGATATATTG GATGATTCTC AAGATCCTGA AATAAAGCAA GAAACCGATT ATTTTCAAGA AGCAGATGAG GTAGTGGAAC TACGTCGGTC CAAAAGAAGA AATGTGAGAC CGGATAGATT TACCGGATGT GATTATCAGT TAGATACAAA TGACGGGTGG GTGCGGATGA TGCCGTACCA GATTGGAAAA TGGGCTGTTA GTGTGGAGAG TGATGACGAC GAGGACGATA GCAATGATGC TGGTGATACT AATGATGATA TGTATGTACC ATTATCGCAT TTATTCATCA AGAAAAAGAT AACTAATTCT CGAGAAGCGA TACCGAAAAG TATGAAAGGC GGGATTGTTT TGGTAGACAA GAGGAGAGTA CATGGATTTG TTAGAAAAGA GAGGAAATCC GAGCTTTCGG TTATTCCTTT CACTCCAGTA TTTGAGCCTA TACCGTTGGA ACAGTTTGGT CTTAATGCTA ACTGTTTGGG TGGGGGTGGC AGTTTTTCAA GAAGCCAGTA CTTTGATGAG ATTGAAAAGT ATCGAAGTAA ATCCTCGAAA TACGGGAAGA AAATGACAGA AATGGAAGAG ATGATGGAAT CTGATCTATG TTGGAAAGGT CCTAACTACG TGAAGTCGGT TCAAAAACGA ACACCCCGAC CTTCGCGGTC ATTTGCTCCA AAAACAGAGG ATTCCGATGA ACCACGGGTC TATAAGAAAG TAACATTGAG TGCAGGTGCA TATAACAAGC TGATAGATTC ATACATGAAC AACATTGAGT CCACAATTTC AGCCAAGGAC GAGCCTACCA ATGTTGTTGA CCAGTGGGAG GAGTTAAAGA AGACGAATTT CGCATTTAAA CTGCATAGGG ATATGGAACA AAACTTAAGT GAGGATGGTG AGGGAGAGAC TTCAGAGAAC GAAATGTTAT GGAGAGAAAT GGAACTCTGC TTGGCTTCTT CTTACATACT CGATGACAAC GAGGCAAGAG TGGACAACGA GGCTTTAGAA AAGGCGAGAA GTGGTTGTGA ACACGATTAT AAGCTGGACG AAGAAATCGG GATGTGTTGC AGGTTATGTG GTCATGTAGG AACTGAGATA AAAGATGTAT CTGCACCATT TGCAGAACAT AAGAAATGGA CAATGGACAC TAAGCAGCTC GAAGAAGATG ACATAAAGAC TAAGTTGAGC CACAAAGAAG GCGAGACTGA AGATTTCACT ATGTCAAGTG ATTCTTCGAA AATGCTTGCC GCTGAAGAAA GTGAAAACGT TTGGGCATTA ATACCTCAGC TTAAGAGAAA ACTACATATG CATCAACGAA GAGCTTTTGA GTTTCTCTGG AGAAATCTAG CAGGATCTGT GGAACCCTCG CTTATGGATC CCACTTCAGA TAACATAGGT GGTTGTGTGA TCTCTCATTC TCCAGGAGCT GGTAAAACTT TCCTAATAAT CGCTTTCCTC ACTAGCTACT TGAAGCTATT TCCCGGGAAA AGACCCTTGG TTCTTGCTCC TAAAACAACT TTGTACACAT GGTACAAGGA GTTCATCAAA TGGGAGATCC CAGTTCCGGT TCATTTGATC CACGGTCGAA GAACCTACTG TACCTTCAAG CAGAACAGCA CAATTCAGTT CAATGGAGTT CCGAAACCGA GCCAAGATGT TATGCATGTT CTTGATTGCT TAGAAAAGAT ACAGAAATGG CACGCGCATC CGAGTGTTCT TGTAATGGGT TACACCTCGT TTCTGACTTT GATGAGGGAA GACTCGAAGT TTGCTTATCG AAAGTACATG GCTAAAGTGC TAAGAGAGAG TCCTGGGCTT CTTGTTCTTG ATGAAGGACA TAACCCAAGG AGTACCAAGT CGCGATTACG CAAGGCCTTG ATGAAAGTTG GTACTGACTT AAGGATACTT CTTTCGGGTA CTTTGTTTCA GAACAACTTC TGCGAGTACT TCAACACGCT GTGTTTGGCT AGACCAAAGT TTATTCATGA GGTTCTAATG GAGTTAGATC AGAAATTCAA GACCAATCAA AGTGTAAATA AGGCGCCTCA CTTGCTCGAG AATAGAGCTC GTAAATTCTT CATCGATATA ATTGCCAAGA AGATTGATGC AGGCGTGGGA GATGAACGCC TTCAAGGTCT CAATATGTTG AAGAACATGA CTAATAGTTT CATTGATAAC TATGAAGGGA GTGGAAGTGG AAGTGGCGAT GCTCTTCCCG GTCTACAAAT CTATACACTA GTGATGAACT CGACGGATAT ACAGCATAAG ATACTCACAA AACTTCAGGA TGTAATAAAG ACTTATTTCG GGTATCCACT CGAGGTCGAG CTTCAGATAA CATTGGCAGC TATACATCCT TGGTTGGTCA CGAGCTCAAA CTGTTGCAAA AAATTCTTCA ACCCGCAAGA ACTTTTAGAG ATCGAAAAAC TCAAGCACGA TGCAAAGAAA GGATCTAAAG TCATGTTTGT GCTAAACCTT GTCTACCGAG TGGTCAAGAG GGAGAAGATC TTGATCTTTT GCCACAACAT TGCGCCAATC CGTATGTTTA CCGAACTGTT TGAGAATGTT TTCAGGTGGC AAAGAGGCAG AGAGATCTTG ACCTTAACCG GTGATCTTGA ACTGTTCGAG AGAGGCAGAG TGATAGACAA ATTTGAAGAA CCTGGAAACC CATCCCGAGT CTTACTGGCC TCAATCACAG CTTGCGCAGA AGGGATTAGT CTAACCGCTG CTTCACGGGT CATCATGCTC GACTCGGAAT GGAACCCTTC AAAGACAAAG CAAGCCATAG CTCGTGCATT CAGACCGGGA CAGCAGAAAG TTGTTTATGT TTATCAGCTC TTGTCCAGAG GAACATTAGA GGAAGATAAG TACAGGAGGA CAACATGGAA AGAGTGGGTC TCGAGTATGA TATTCAGTGA GGAGTTTGTT GCGGATCCAT CTCTATGGCA AGCTGAGAAG ATTGAAGACG ATGTTCTTAG AGAGATCGTT GGAGAAGATA AAGTTAAATC TTTCCATATG ATCATGAAGA ATGAGAAGGC TTCAACAGGG TAA |
| Length | 3783 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 8239007.. 8243243 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G20420.1 |
| Description | chromatin remodeling 42 |
| TAIR curator summary | |
| Alias | [CHR42][chromatin remodeling 42] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.7082 |
Ahg910333 | alpha-crystallin domain 32.1 |
| 22.4499 |
Ahg945284 | GPCR-type G protein 1 |
| 30.5941 |
Ahg481464 | Protein of unknown function (DUF778) |
| 38.3406 |
Ahg941495 | nudix hydrolase homolog 24 |
| 38.9615 |
Ahg491198 | conserved peptide upstream open reading frame 2 |
| 39.1918 |
Ahg490829 | phosphoenolpyruvate carboxykinase 1 |
| 43.2666 |
Ahg938312 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein |
| 44.1588 |
Ahg488679 | |
| 44.6766 |
Ahg489570 | long-chain acyl-CoA synthetase 7 |
| 49.7494 |
Ahg939752 | starch branching enzyme 2.2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|