Detail



ID : Ahg938377

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938377|scaffold_502568.1
Sequence
AGGCTAAGGA ACTTGAACTA ATGGGTAAGA AGAAGTCAGA CGAGAGTGCT GCTACCACGA AGGTGAAGCC AAGTGGGAAA GATGCTTCTA AAGATTCTAA AAAGGAGAAA TTATCAGTCT CCGCCATGCT TGCAGGCATG GATCAGAAAG ATGATAAACC GAAGAAGGGC TCATCATCTA GATCCAAAGC TGCTCCAAAA TCTACATCCT ACACTGATGG CATAGATCTT CCTCCTTCTG ACGAAGAAGA TGAAGGTGAA TCTGATGAGG AAGAGAGACA GAAGGAAGCA AGGAGGAAGC TGAAGAGTGA ACAAAGGCAC CTTGAGATAT CTGTGACTGA TAAGGAACAA AAGAAGCGAG AGGTGAAAGA AAGATTAGCT CTCCAGGCTG CAGAGATGGC AAAGAGGGAG GCCTTGAAGG ACGACCATGA TGCATTCACG GTTGTTATTG GAAGCAAGAC CTCAGTGCTT GAAGGAGACG ACTCGGCGGA TGCAAATGTT AAAGATATTA CCATCGAATC TTTTTCTGTA TCTGCTCGAG GTAAAGAGCT TTTGAAGAAT GCCTCTGTCA AGATTTCACA TGGTAAAAGG TATGGGTTGA TCGGGCCAAA CGGAATGGGA AAGTCTACAC TGTTAAAGCT TTTAGCTTGG AGGAAGATTC CAGTGCCAAA GAATATTGAT GTTCTTCTTG TTGAGCAAGA GGTGGTTGGT GATGAAAAGA GTGCTCTGAA TGCAGTTGTT TCTGCCAATG AAGAGTTGGT TAAGCTACGG GAAGAGGCTG AAGCTCTGCA GAAGTCGTCT TCGGGAGCTG ATGGAGAAAA TGTTGATGGC GAGGATGATG ATGATACTGG AGAAAAGCTT GCTGAATTGT ATGACAGGCT GCAAATTTTG GGGTCAGATG CTGCTGAAGC ACAGGCTTCC AAAATTCTTG CGGGGTTAGG TTTCACAAAA GATATGCAAG TGCGTCCAAC TCAGTCCTTC AGTGGTGGCT GGAGGATGCG AATATCGTTA GCTAGAGCTC TGTTTGTGCA GCCTACTCTT TTACTGTTAG ATGAACCCAC TAACCATCTT GACCTGAGAG CTGTTCTATG GTTAGAAGAG TATTTGTGTC GCTGGAAGAA GACGCTAGTT GTTGTTTCAC ATGACCGGGA CTTCCTCAAC ACAGTCTGCA CGGATATAAT ACATCTCCAT GACCAGAATC TCCACTTCTA TCGTGGTAAT TTCGATGGTT TTGAAAGCGG ATATGAGCAG CGTCGCAAGG AGATGAACAA AAAATTTGAT GTCTATGAGA AACAGATTAA AGCAGCTAAG AGGACTGGAA ACCGGGCTCA ACAGGAGAAG GTAAAGGACA GGGCCAAGTT TACTGCAGCA AAAGAAGCAT CCAAGAGTAA GGCAAAGGGT AAGGCACTGG ATGAAGAAGG CCCAGCACCA GAAGCTCCAA GGAAATGGAG AGATTATAGT GTGGTGTTCC ACTTTCCAGA ACCAACCGAG CTCACTCCTC CTCTTCTACA GTTGATTGAG GTTAGCTTCA GCTACCCCAA CAGGCCAGAT TTCAGGCTCT CGAATGTTGA TGTAGGTATC GATATGGGGA CACGGGTTGC TATAGTTGGG CCTAACGGAG CAGGAAAGTC CACTCTATTA AATCTTCTTG CGGGAGATTT AGTTCCAACA GAGGGTGAAA TGAGAAGAAG CCAGAAGCTG AGGATTGGCA GGTATTCTCA GCACTTTGTT GACCTGTTGA CAATGGGGGA AACACCGGTT CAGTATCTTC TTCGTCTTCA TCCTGACCAA GAGGGATTTA GCAAGCAAGA GGCAGTGCGA GCGAAGCTAG GCAAGTTTGG GCTACCAAGT CACAACCACT TGTCTCCAAT TGCGAAATTG TCCGGAGGAC AAAAGGCTAG GGTTGTGTTC ACCTCGATCT CAATGTCAAA GCCTCACATT TTGCTTCTGG ACGAGCCTAC AAATCACTTA GACATGCAGA GTATAGATGC GTTGGCGGAT GCACTAGATG AGTTCACAGG TGGAGTTGTG TTGGTGAGTC ACGACTCGAG ACTCATATCG CGTGTCTGTG CGGAAGAAGA GAAGAGTCAA ATTTGGGTTG TAGAAGACGG AACAGTGAAT TTCTTCCCAG GCACATTTGA AGAGTACAAA GAAGATCTCC AAAGAGAAAT CAAAGCAGAA GTTGATGAGT GAAGTTTTGT TGTTAGCTTC TAAGGTAAAC TCAGTCTCCT TTATATTTTA TAACAAACTC AAAAAGTTTT GGACAATTTT ATTTTTAGCA GTCGTGTTCT TTCATCATTT GTGCGTTA 
Length2308
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16120180.. 16122468
Download Sequence
A.thaliana
AGI-codeAT3G54540.1
Descriptiongeneral control non-repressible 4
TAIR curator summarymember of GCN subfamily
Alias[ABCF4][ATGCN4][GCN4][ATP-binding cassette F4][general control non-repressible 4]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg485358 casein kinase II, alpha chain 2
15.0997 Ahg937965 FG-GAP repeat-containing protein
15.8745 Ahg328336 RING/U-box superfamily protein
16 Ahg920646 alanine aminotransferas
16.8819 Ahg473397 Protein of unknown function (DUF760)
17.8326 Ahg490893 heavy metal atpase 1
18.4391 Ahg475327 protein phosphatase 2A-2
23.3238 Ahg495848 voltage dependent anion channel 4
24 Ahg888739 P-type ATP-ase 1
31.5595 Ahg949937 NADH-dependent glutamate synthase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression