Detail



ID : Ahg485358

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485358|fgenesh2_kg.5__1350__AT3G50000.1
Sequence
ACCGCGGGAG AGTTCACTGA ATGATTACAT GCACCTAATC TTCTTCTTCT CCTACTTTCT TCGACGTTTC TTGTTATTGT GCGCCATCTT GATCTTACGT GCGCCAACGG CGCATTCTCC TATACCACCG TTAACGTGCG TCACCACCGG AACCGTTGAA TCAGACGTTT CTGGTATCAG GTTCGATCGT TGCCTCGATA CCGATTCTCT CGCCGAGATC TCTCTTTCCT CCGTCACAGG AGCGATGTCG AAAGCTCGTG TGTATACCGA TGTTAACGTG ATTCGACCTA AGGATTATTG GGATTACGAA TCTCTCAATG TTCAGTGGGG GGAGCAAGAT GATTACGAGG TAGTGAGGAA GGTGGGGAGA GGGAAATACA GTGAGGTTTT TGAGGGGATT AACATGAATA GCAACGAGAA GTGCATTATC AAGATTCTCA AGCCTGTTAA GAAGAAGAAG ATTCGAAGAG AGATTAAAAT ACTTCAGAAT CTCTGTGGAG GGCCGAATAT TGTCAAGCTG CTTGATGTTG TCAGAGATCA ACACTCAAAA ACACCAAGCT TGATATTTGA GTATGTTAAC AGTACTGACT TTAAGGTTCT GTATCCAACA TTGACTGATT ATGACATCCG ATACTACATC TATGAGCTGT TGAAGGCATT GGACTTCTGC CACTCACAAG GAATAATGCA CAGAGATGTC AAGCCACACA ATGTCATGAT CGACCATGAG CTGCGCAAAC TTCGCCTTAT AGATTGGGGT CTCGCTGAGT TTTATCATCC TGGAAAAGAG TACAACGTCC GCGTGGCCTC AAGATACTTC AAGGGTCCCG AACTTCTAGT GGATTTACAG GACTATGACT ATTCCTTGGA CATGTGGAGC CTTGGTTGCA TGTTTGCTGG GATGATATTC CGCAAGGAAC CTTTCTTCTA TGGCCATGAC AACCAGGATC AGCTCGTCAA AATTGCCAAG GTACTTGGAA CCGATGAATT GAATGCATAT CTGAATAAGT ATCAGTTAGA ACTTGATGCT CAACTAGAGG CACTTGTTGG GAGACATAGC AGGAAGCCTT GGTCCAAATT CATCAACGCC GACAATAGGC ATTTGGTCTC ACCTGAGGCG ATTGATTACC TGGACAAGCT ACTCCGGTAT GATCATCAAG ACAGATTAAC CGCAAAAGAA GCAATGGCTC ATCCCTATTT CGCTCAAGTC AGGGCAGCAG AAAGCAGCAG AATGAGGACT CAATAGAGAT GTCTCTGTCG ATTTTGTTTC TTCTTCTCCA ATGTGCTCTT TTGTTGTTTA CTAAAAATAC ATTTTCATAT CCATATGGAT TTCTTTTGAA ATGTCGCAGT TATTTTAAAT TATGGATTTC TAAATATGAG AACTTTTATT ACT 
Length1393
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14062227.. 14064696
Download Sequence
A.thaliana
AGI-codeAT3G50000.1
Descriptioncasein kinase II, alpha chain 2
TAIR curator summarycasein kinase II catalytic subunit alpha
Alias[ATCKA2][CKA2]["casein kinase II, alpha chain 2"]
Gene coexpression
MR
MR Locus Description
1 Ahg918979 splicing factor Prp18 family protein
2.82843 Ahg947537 crooked neck protein, putative / cell cycle protein, putative
3 Ahg488691 transcription regulator NOT2/NOT3/NOT5 family protein
4.69042 Ahg938151
4.89898 Ahg487985 adaptin family protein
8.3666 Ahg938377 general control non-repressible 4
8.48528 Ahg344684 FTSH protease 3
8.60233 Ahg474459 phosphoenolpyruvate carboxylase 1
10.4881 Ahg937965 FG-GAP repeat-containing protein
11.4891 Ahg477928 SAC3/GANP/Nin1/mts3/eIF-3 p25 family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression