Detail



ID : Ahg938452

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938452|scaffold_502643.1
Sequence
GCTGTTACTA GTGTCTCGAG ATGTATCTGT ACAGTCTTAC TCTGCAGCAG GCGACGGGAA TCATCTGCGC CATCAACGGG AACTTCTCCG GCGGGAAGAC ACAGGAGATT GCGGTAGCTC GTGGGAAGAT TCTGGATCTT CTCCGTCCGG ACGAGAACGG TAAGATCCAG ACGATACACT CTGTGGAAGT ATTCGGTGCA ATTAGATCTT TAGCTCAGTT TAGGTTGACT GGTGCGCAAA AGGATGNNNN NNNNNNNNNN NNNNNNNNNN N 
Length271
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16420795.. 16421040
Download Sequence
A.thaliana
AGI-codeAT3G55220.1
DescriptionCleavage and polyadenylation specificity factor (CPSF) A subunit protein
TAIR curator summary
Alias[AtSAP130b][SAP130b][Arabidopsis thaliana spliceosome-associated protein 130 b][spliceosome-associated protein 130 b]
Gene coexpression
MR
MR Locus Description
24.2693 Ahg929797 Protein kinase superfamily protein
25.6125 Ahg938716 Protein of unknown function (DUF288)
35.4965 Ahg906319 Protein of unknown function (DUF789)
45.3872 Ahg952051
45.4973 Ahg343537 SNF2 domain-containing protein / helicase domain-containing protein
63.4823 Ahg496612 RNA methyltransferase family protein
63.6396 Ahg951859 Alpha amylase family protein
66.3325 Ahg322445
68.9928 Ahg943674 transducin family protein / WD-40 repeat family protein
70.5691 Ahg890597 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression