Detail



ID : Ahg952051

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952051|scaffold_34300002.1
Sequence
GGAACAAGAA CAGAGTAAAT CAAATGGACA AGAAAAAGAA CCGTGCTGAT CCACTTGCTG CTGGGCGCCA CAAGCTTCAA CAATTTCGTC AAAAGAAGGC TGACAAAGGC ACTGATCAGA AAAAGGACTC CAAAGGCAGT ACAAGCCAAG GCAAATCCTC CAAAAAATCT AATAAATCTG AGAAGCATGA GCGTAAACCT GACACTAGTG CTGTCAGTGA CGAGGCACAA GCTCCATCCC ATGTCAATGT TGCTGAGGAG GTTGTCGATT CTCCACAAAC TTCTTCACAT ACAAAAGCTC ACGAATATGT TTCAGTCCAT GGTTCATCAT CAGAACCTGA TATGCCTCAG CCAGGAAACA CCACTTCTGA TGATGTATCT GAAGTGAGAA AAGAAGTAGT TAATTCTGAA AACGATATCA GTATATCTTT ATCCACTGAA GAAGAGAATA TGAAGTCTAT CAACGGTGGA GTTGCTGGCA CAGTAGGTTC TTTGACATCT GACACTGCAG TTTCTGAGAA GGGAGTTACT CATGACGATG CATCTATTAA TGTTGACGGA ATCTTTACGT CTTCTGGAAA CATAGCGGAG GGGGAAGGAG TTGAAGTTGA AGGTGGGTCT GGAAATGTGG AAAAGCCGCA TCAGCCATCC TCTCTCCATG AAGGCATTCC TGATGTTTCC TTGATTCGTG CAAGGGGAGA TCAGGAAGAA GGTGGTTCAC GCATGGAGCA GTTTTCTGAA TCATCTGCAA AGGCAGGTGT GGATAAGATT GCAACTGAAG AAAGGCAAAC AAGCTATCCA GCTGTTGTGG ATTTATCTGC TTCTCCTTCA CATTTTTCAG AGGGATCCTC AGTTGCATTA GATTCAGTTG AACTAGAAGG ACAAAATGGT AATATTAGAA GCCAACAGAT GAGGGAAGCT GCAGAGCTTA ATGAAGAGAA ACCAGAAACA TCTATTGATT TTCCTAATGA TAGAGATCAC GTGCTTTCAG CTGAACCTGA GGAAAGCTCT GTTGCAGATA TGGCTAGTCA GCTGCAATTG CCTGAGAGCA TCAGTATATC TGGATTAGTG AGCCATGAGG AACCTCAAAA AATCGACACA TTGAATTTAT CTGGAGAAGT TTCCGTTGCT CATGTTCATG AAGGCCCCTC ATTCAGCTTC TTACAGCTTA TTGATATTGT TAAAGGACTT GGCCAAGACG AATATCAAAT TTTGTGCAAC GCAAGAGAGG CTGCTTCCAG TACTGAGCCA GGAACAAGTT CGTTGGAGCG AGTAAGAGAA GAACTGTTTG TTTCGAGTAC CATGGAAGAT TTACTCCACG TGCAACTCAC AGAACAGTCT CATCTGCAAA AGGAGTTTGA TCATCAACAT AACGAATTGG TAGCTGAAAT ATCACAGCTT CGTGCATCAT ATAATGCAGT GATAGAGAGA AATGATTCTC TTGCGGAGGA ACTACTAGAG TGGCAGTCTA AACTCTATGC TGCTACTAGC TCTAATGAGA ACCTTGAAAA TCAGCTTCTT GCTACAGAAG CTCAAGTGGA GGATTTCACT GCTAAGATGA ATGACTTGCA GCTTAGCCTA GAAAAGTCCC TGTTGGATCT ATCTGAGGCG AAAGAAAAGT GCATTAATCT TCAGGTGGAG AATGATACGT TGGTTGCAAT TATTTCTTCC GTGAATGATG AGAAAAAAGA ACTTCTTGAA GAAAAAGAAT CCAAGAACTA TGAGATTAAG CATCTTTCAT CTGAGTTATT GAATTGCAAG AACCTGGCGG CTATACTAAA GGCAGAAGTT GAGCAATTGG AAAACACTAT TGGTCCATTA ACAGATGAGA AGATACATCT TGTGGAGGAA AGATATAGTT TATTGGGTGA GGCAGAGAAC TTACAGGAAG AATTGGCAAA TTGTAAGACG TTGGTCACCC TGCAAGAGGT GGAAAATTCA AACATAAGGG AGACGCTTTC TTTACTGACA GGCCAACAGA CTAAGTTTGA AGAGAACAAC CTACATCTCA GAGAAGAAAA TGAGAAAGCA CATCTAGAAC TTAGTGCACA TCTGATCTCG GAGACTTATT TATTGTCCGA GTATTCCAAT CTAAAGGAAG GATATTCTTT GTTGAATAAT AAGCTCTTGA AGTTTCAAGG GGAAAAGGAA CATTTGATTG AGGAAAATGA TAAACTTACA CATGAACTTC TTACTCTTCA AGAGCGTACG TCAATTGTAG ATGAAGAGCG GAGTCATCTA GAAGTTGAGT TAAGAGAAGC AATAGCGCGC CTTGATAAAT TGACTGAAGA AAATACATCT TTAACTAGCA GCATCATGGT AGAAAAAGCT AGAATGGTAG ACATTGGTAG CGAGGATGCT TCAGGTTTGA TCAATCAGGA AATTTCTGAG AAACTTAGTG GAAGTTCAGA AGTCGTGGTT AGTAAACAGG GTGCATCTCT TCTTGAAAAT ACACAATATA CAAATTCGAA AGAGGTAATG GAAGATACTT CTGAGTTTCT CGATAAAGGT GCCACACCAG CAGTATCAAA ATTGATTCAA GCTTTTGAGT CAAAACGGAA ACCAGAAGAA CATGAATCTG AGAACGCACA GTTAACTGAT GATCCATCAG AAGCAGATCA ATTTGTTTCT GTGAATGTGC AGATTAGAAA TTTGAGAGGC TTGCTTCATC AGTTACTGTT GAATGGTAGG AAGGCTGGTA TACAATTCAA GCAGTTAAAT GATGACAGGA CATCAACAAA TCAAAGACTC GAGGAGTTAA ATGTCGAGTT TGCATCTCAT CAGGATCACA TTAATGTTCT GGAGGCAGAT ACTATTGAGA GTAAGATTTC ATTTGAAGCT CTGAAGCATT ATTCGTATGA GTTGCAACAT AAAAACAATG AACTTGAACT TCTCTGTGAT TCATTAAAGC TAAGAAATGA TAATGTCGGT GTAGAAAACA CGGAGCTCAA GAAGAAGCTG AATTCTTGCT TATTGAGAAT TAATGAGCTT GAAATTCAGC TGGAAAACTT ACAGCAGAAT TTAAGTAGCT TTTTGTCCTC AATGGAAGAA CAGTTAGTGG CCTTGCAGGA TGAATCTGAG AGGGCAATGA TGCTAGAACA TGAACTGACA TCATTGATGT CTGAATTTGG TGAAGCAGTT GTAAGGCTTG ATGATTGTTT ACTCAGATCT GGCACTTCTG GAGCTAATGC TGGCTTAGAT ATGACCAAGC GCATATCTGG TTCTGTTGAT GTGGCTGTAA AGGTGATTGA CGACCTGGAG GAAAAACTTG AAGCTGCTTA TGTGAAGCAT GAGTCCACGT CAAATCAATA TGAGGAATTG AACTTCTTCA ATGCAGAAGG TCTATGCCGA TCTGACGAAA TTGATTACTG AATCATGTGG GTCAGTGGAG AT 
Length3392
Protein Sequence
Protein Residue
Map Locationscaffold_343: 3905.. 7946
Download Sequence
A.thaliana
AGI-codeAT4G31570.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.2915 Ahg893776 protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases
7.74597 Ahg923061 NC domain-containing protein-related
9.48683 Ahg940804 Auxin-responsive GH3 family protein
10.5357 Ahg483334 vascular plant one zinc finger protein 2
13.5647 Ahg475001 hydroxyproline-rich glycoprotein family protein
15.9687 Ahg950248
16.2173 Ahg335224 Pentatricopeptide repeat (PPR-like) superfamily protein
18.4391 Ahg476910 Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein
22.4499 Ahg938705 INO80 ortholog
27.3496 Ahg345894 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression