Detail



ID : Ahg938787

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938787|scaffold_502978.1
Sequence
TGAATTAGGG ATTTGGGCTC ACCATGGCTC CTGGAGGTAG TGCTTTGAAA GAAGTCATGG AATCTAATTC AACGGGAATG GATTATGAGG TTAAAACGGC AAAAGTGGAA GTTAATAATA ATAACAAACC TACAAAACCA GGGAGTGCAG GGATTGGAAA ATATGGGATC CATTCGAACA ATGGTGTTTA TGAGCTTCTT GAATGTCCCG TTTGTACAAA TTTAATGTAC CCTCCAATTC ATCAGTGTCC AAATGGCCAC ACATTATGTT CAAACTGCAA AGTGAGAGTG CAGAACACAT GCCCTACATG TCGCTATGAG CTTGGTAATA TAAGATGCTT AGCTCTTGAG AAAGTTGCAG AGTCTTTGGA AGTTCCATGC CGGTACCAAA ATTTGGGGTG TCATGACATT TTTCCTTACT ACAGCAAGCT TAAGCACGAG CAGCATTGCA GGTTTAGGCC TTACACTTGT CCTTATGCTG GTTCTGAGTG CTCGGTTACA GGTGATATCC CCACACTTGT TGTTCATCTC AAAGATGATC ATAAAGTCGA TATGCATGAC GGATGCACCT TCAACCACCG ATATGTAAAG TCAAATCCAC ATGAAGTCGA AAATGCTACA TGGATGCTTA CGGTGTTCAA CTGTTTTGGG AGACAGTTCT GTTTACACTT TGAGGCGTTC CAGCTGGGAA TGGCTCCAGT GTACATGGCA TTCCTTCGTT TCATGGGAGA TGAGAACGAG GCAAAGAAGT TCAGTTACAG CTTGGAAGTA GGAGCTCATG GACGTAAATT AACATGGCAA GGGATCCCTA GAAGCATCCG TGACAGTCAC AGGAAAGTCC GGGACAGTCA AGACGGACTC ATCATCCCAA GAAACCTCGC ACTCTACTTC TCTGGAGGTG ATAGGCAAGA ACTCAAGTTG AGAGTGACCG GGCGAATCTG GAAAGAGGAG TAAACCAAAA CGAAGAAAAG AAA 
Length973
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17666561.. 17668128
Download Sequence
A.thaliana
AGI-codeAT3G58040.1
Descriptionseven in absentia of Arabidopsis 2
TAIR curator summaryEncodes a RING finger domain containing protein that interacts with AtRAP2.2.
Alias[SINAT2][seven in absentia of Arabidopsis 2]
Gene coexpression
MR
MR Locus Description
7.93725 Ahg483538 histone-lysine N-methyltransferase ASHH3
9.16515 Ahg480280 MAK10 homologue
16.5831 Ahg338501
17.6635 Ahg496927 C2H2-like zinc finger protein
19.1311 Ahg482255 F-box family protein
20.4939 Ahg473042 Dof-type zinc finger DNA-binding family protein
21.9089 Ahg933310 vacuolar proton ATPase A1
25.1197 Ahg933547 high-level expression of sugar-inducible gene 2
27.2213 Ahg481407 binding
27.55 Ahg901520 Modifier of rudimentary (Mod(r)) protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression