Detail



ID : Ahg939454

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939454|scaffold_503645.1
Sequence
CATAGAGACT AGAGAGTATA ATGGCCACGA AAATATTCTT GGCATCCCCC GTTATCTCCG CCACCAGAAC GCCGATCGTC CCAAAGGCGA TTGCATCACG TCTAGGCACC TCCCTGGCCG CCGCATTGGC CGCGACTTCC GTGCTGACTA TGGTTCCGGT GCTGCCGGCG GCTGGCGAGG GAAACCAAAC GTACAAAATT TACTACGGGA CGGCAGCGAG CGCGGCGAAC TACGGGGGAT ACGGGGGGAA CTCGGACAGG AAGGCATCGG CGGAGTATGT GTACGATGTG CCTGAAGGGT GGAAGGAGAG GCTGGTGTCG AAGGTGGAGA AGGGGACAAA CGGAACAGAC AGCGAATTCT ACAACCCGAA GAAGAAGACG GAGAAGGAGT ACCTGACATT CCTGGCGGGA TTCAGACAGC TGGCGCCGAG GGATGTGATT CTGAACAACC TTGCCTTGTC GGACGTGGAG CTGCAGGATT TGATAGCCGG CGCCGACAAA GTGGTGTCGG AGGAGAGGAA GGACGAGACA GGGCAGGTCT ACTATCTGTA CGAGATCGAT GGGGTTGGAA AGCACAGCCT GATCACAGTC ACTTGCGCCA AGAACAAGCT CTACGCCCAT TTCGTAAACG CCCCTGCGCC CGAGTGGAAC CGCGACCAGG ATACATTAAC CCACCTTCGC GACTCCTTCA AGACTGTCTC TTCTTCTTGA AATTCCTCCT TCAATGTTCA 
Length730
Protein Sequence
Protein Residue
Map Locationscaffold_5: 20062691.. 20063411
Download Sequence
A.thaliana
AGI-codeAT3G63540.1
DescriptionMog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
TAIR curator summaryConceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence.
Alias
Gene coexpression
MR
MR Locus Description
9.69536 Ahg471331 Glycine cleavage T-protein family
14.6287 Ahg938526 sedoheptulose-bisphosphatase
17.5784 Ahg472262 Cupredoxin superfamily protein
19.6977 Ahg471025 chloroplast RNA binding
21.5639 Ahg478862 Aldolase-type TIM barrel family protein
24.2487 Ahg473673 alpha/beta-Hydrolases superfamily protein
24.8193 Ahg475922 hydroxypyruvate reductase
25.923 Ahg478641 phosphoglycerate kinase 1
27.037 Ahg937450
28.3725 Ahg473747 glyceraldehyde-3-phosphate dehydrogenase B subunit
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression