| Annotation |
|---|
| Description | jgi|Araly1|473747|fgenesh2_kg.1__3701__AT1G42970.1 |
| Sequence |
TCCCGATTTG TATCTTACCT ACATAATAAC CACATATTTC TTTGCTTCAC TTTGAACCAT TGGTTGCTTT TGATCAAAAC CAAAGGATGT GTGTATGTAT GTATATATTC TAACGCTCAA AACTGATCAG TAGCATTCGT AGATTCTTCT TGTTTCACTT GCAGCTATGG CCACACATGC AGCTCTCGCC GTCTCCAGAA TCCCGGTCAC ACAGAGACTG CAGTCTAAGA GTGCCATTCA CTCTTTCCCT GCTCAATGCT CCTCCAAGAG GCTAGAAGTT GCTGAATTCT CCGGTCTGCG TATGAGTAGT AACGGTGGGG AAGCATCTTT CTTCGATGCT GTAGCTGCAC AAATCATCCC CAAGGCTGTG ACAACATCCA CTCCTGTTAG AGGAGAGACA GTGGCCAAAC TGAAGGTTGC GATTAACGGG TTCGGACGGA TTGGTAGGAA CTTCCTCAGG TGTTGGCATG GTCGTAAGGA CTCTCCTCTC GAAGTTGTTG TGCTTAATGA CAGTGGTGGT GTCAAGAATG CATCCCATTT GCTCAAGTAT GACTCCATGC TTGGAACCTT CAAGGCTGAA GTGAAAATTG TGGACAATGA AACTATCAGC GTTGATGGTA AGCTCATCAA AGTTGTCTCC AACAGAGACC CTCTTAAGCT TCCATGGGCT GAGCTCGGCA TTGACATTGT TATCGAGGGA ACAGGAGTGT TTGTTGATGG GCCAGGAGCA GGGAAGCATA TCCAAGCTGG AGCCTCGAAA GTGATCATCA CTGCACCAGC CAAAGGTGCT GATATCCCTA CCTATGTTGT GGGCGTCAAT GAGCAAGACT ATGGTCACGA CGTCGCTAAC ATCATTAGCA ATGCATCTTG CACCACCAAT TGTTTGGCAC CCTTTGCTAA AGTCTTGGAT GAAGAATTTG GTATCGTCAA GGGAACAATG ACAACCACAC ACTCTTACAC CGGAGACCAA AGGCTTCTAG ATGCATCACA CAGGGACCTA AGGCGTGCAA GAGCCGCAGC ACTGAACATA GTGCCTACCA GCACAGGTGC AGCCAAGGCG GTCTCATTAG TGTTGCCGCA GCTGAAGGGT AAACTCAACG GGATTGCACT CCGTGTGCCA ACACCAAACG TCTCAGTGGT TGACCTTGTT ATAAACGTTG AGAAGAAAGG TTTGACAGCA GAGGACGTGA ACGAGGCCTT CAGAAAAGCC GCTAATGGAC CGATGAAAGG CATTTTAGAC GTTTGTGACG CCCCTCTTGT CTCTGTTGAC TTCAGGTGCT CTGATGTCTC TACCACCATT GATTCTTCCC TCACTATGGT TATGGGTGAT GATATGGTCA AGGTGGTTGC TTGGTATGAT AACGAGTGGG GTTACAGCCA AAGAGTAGTG GATTTGGCTC ACCTAGTGGC TAGCAAGTGG CCGGGAGAGA AAGCTGTTGG AAGTGGAGAT CCTTTGGAGG ATTTCTGCAA GACAAACCCG GCCGATGAGG AATGCAAAGT CTATGAATGA ACAACTTTGA TCATTTCTTT CTTTATTTTT CACCAAAACA ATACTTTGTA TCATGAGTTA TTATTCGAAA TTGTATTATG CATACCTCTT TGTTTTTCTC ATAAGATTTT CTTGTCTGAT GAGCAACTAT ATGTTAAGAC TGATGAGAAA TGTATTTGAG AACCATTTTA TGCTACATGT TAAAACGGAA TTTATTTGAG CAATGTATGA CAAAACAAAA AAATTGTTTA ATTTGGTTTA CAAAAAAA |
| Length | 1758 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 20725475.. 20728154 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G42970.1 |
| Description | glyceraldehyde-3-phosphate dehydrogenase B subunit |
| TAIR curator summary | Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers. |
| Alias | [GAPB][glyceraldehyde-3-phosphate dehydrogenase B subunit] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg922911 | Chlorophyll A-B binding family protein |
| 1.41421 |
Ahg490821 | serine transhydroxymethyltransferase 1 |
| 1.73205 |
Ahg938526 | sedoheptulose-bisphosphatase |
| 2.44949 |
Ahg478641 | phosphoglycerate kinase 1 |
| 3 |
Ahg471025 | chloroplast RNA binding |
| 3.31662 |
Ahg496993 | ferredoxin-NADP(+)-oxidoreductase 1 |
| 3.4641 |
Ahg486816 | chloroplast stem-loop binding protein of 41 kDa |
| 3.74166 |
Ahg471331 | Glycine cleavage T-protein family |
| 3.87298 |
Ahg485801 | high cyclic electron flow 1 |
| 4 |
Ahg478862 | Aldolase-type TIM barrel family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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