Detail



ID : Ahg939541

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939541|scaffold_600085.1
Sequence
TTGTATCGAT CTCCTTTACT CTGCAATGGA CCTAAATGCT TCACCCCAAC CCGAAGAAGA CGAGGAATCC TTTAAGAGAC GTCATGAAGA TCGAGTTGAA TCTGCTGTTG AGATCGCTAG ACGGGAGCGT GAAGAACGAA AGAAACGAAT GAGATATGAC AGGCCAACCA GAAGCTCTCA GCCGGTTTTT CGTGACCAGT CTTATCAGAA GAGAGATACT AGAGTTTATG ATCAAAGCAA GCTTCCTCAG GGTTGGCTAG ATTGTCCTGG TTTTGGTCTG GAGATAGGTT GTATTATTCC TTCTAAGGTT CCTCTTAGTG AATCTTACAA CGAACATGTT CCTCCTGGTA AAAGATACTC TTTTAAACAG GTGGTCCGTA ACCAGAGAAT TAATGGAAGA AAACTTGGTC TTGTGATTGA TCTAACTAAT ACAACTCGTT ACTACCCTAC ACTTGACTTA AAGAAGGATG GCATCAAGCA TGTTAAGATT GCATGCAGGG GTCGTGATGC CGTGCCTGAT AATGTGTCTG TAAACACCTT TGTCAACGAG GTTCTGCAGT TCGTCCTTAA TCAAAAACAC GCAAAGAAGT ATGTCCTCGT CCACTGTACA CATGGGCATA ATCGGACAGG TTTCATGATA GTTCATTATC TTATGCGCTC TATGCCAACG ATGAACGTTA CACAGGCATT GAAGTTGTTT TCTGATGCCC GCCCACCTGG GATTTATAAA GCGGATTATA TTGATGCTTT ATACACTTTT TATCACGAAA TAAAGCCTGA GAGTGTTACT TGCCCACCAA CTCCTCAATG GAAGAGGTCT ACCGAGCTTG ATCTTAATGG TGAAGCTGTT CAAGATGATG ATGATGATGA TGATTCTCCG CCTGACCCTG TTCAAGAAAT TAATCAGGAG ACTGTGAAGA TGTCAAATGA TGACATTTTG GGTGATGAAA TACCCCATTA TCAGGAGGAA GCTTACCGGC AATTCTGTTA TAAGATGCTT TATCCAGAAA ACAAGAAGAT GAATATTGGG GGAGGAGGAT GTAAGCCATT CCCAGGTTCG CACCCTGTAT CATTAGACAG GGAGAGTTTG CAACTTTTGA GACAGCGGTA CTATTATGCG ACATGGAAGG CAGATGGAAC ACGTTATATG ATGCTCTTAA CTATAGATGG GTGCTATTTG ATAGATAGGA GCTTTAAGTT TCGGAGGGTA CAGATGCGTT TTCCCTGTAA GCACTCACGT GAGGGAATTT CTGATAAAGT GCATCACTAC ACTTTGCTTG ATGGAGAGAT GGTCATAGAT ACCCCGACAG GTGAACAAGG GGAGGCGAGG AGGAGGTACC TCGTATATGA TATGGTAGCA ATCAACGGCG AATCAGTCGT AGAGCGGACT TTCTGTGAAA GATGGAACAT GTTCGTGCGT GAGGTGATCG GACCTCGAGC AGCTGAGAAG CTCAGAAGTC ATTGCTATAG ATATGACCTT GAGCCTTTTG CGGTACGGAT GAAGGGTTTT TGGTTACTTT CGACTGTTGA GAAGCTTTTG AAGAATACCA TTCCATCGCT TTCGCATGAA GCAGATGGCT TAATATTTCA GGGTTGGGAT GATCCTTATG TTCCACGAAC CCATAAAGGT CTGTTGAAGT GGAAGTATGC AGAAATGAAC TCGGTAGACT TTCTGTTTGA GACGGGTGAG GAGGAGGGGC GTGGTTTCCT CTTCTTGCAT GAAAGAGGGA AGAAAAAGCT TATGGAAGGA TATTCAGTTG AGTTTAGAGA TGATTCGGAC CCGTCAAGTT ACAATGGGAA GATTGTAGAG TGTGCATGGG ATAAGGATAA GAAAGTTTGG TTTAGCATGC GGATCAGAGT TGACAAAACT ACACCAAATG ATATCAACAC CGCTCGTAAG GTGATAAAGA GCATAAATGA TAACATCACT GAGGAGGTGC TGCTTCAGGA AATAAAAGAG ATCATACGTC TCCCGATGTA CGCTGACCGC ATTCGAAATG ATAGTCAAGC TGCACGCCGC AAGTAGAGAT TACATTTTTT TAGTAA 
Length2046
Protein Sequence
Protein Residue
Map Locationscaffold_6: 317703.. 321744
Download Sequence
A.thaliana
AGI-codeAT5G01290.1
DescriptionmRNA capping enzyme family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.47214 Ahg920669 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
5.2915 Ahg944726 Pyridine nucleotide-disulphide oxidoreductase family protein
13.3041 Ahg488831 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
15.4919 Ahg944232 long-chain base1
16.9706 Ahg478222 mRNA capping enzyme family protein
17.088 Ahg888428 compromised recognition of TCV 1
18.3303 Ahg920744 Protein of unknown function (DUF1295)
18.5203 Ahg937238 Transducin/WD40 repeat-like superfamily protein
20.0749 Ahg355042 pleckstrin homology (PH) domain-containing protein
20.7123 Ahg494831 eukaryotic release factor 1-1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression