Detail



ID : Ahg888428

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|888428|Al_scaffold_0007_414
Sequence
ATGGCGAAAA ACACAGTCGC CGATATCGTA ATTCTCGACA GTGACAGTGA CGACGACGTC GGAGGAGGAA TAGGAATGGG TCGAAGCTTG ACATCTCTTA TGGAGAATCA GCAAGTTTCG AACGCTGATG CTGCGACGGT GGCTCCTCGA GAAACCCTAG AATGTCGGAG TTTCTGGAAA GCCGGCGAAA ACTTTGTGAT CCCTTCCGGT GTTACTCCAA CTGCTCCAGG TATGGTTGAG CATGCTCGTG TTCATCCAAA GTTTCTTCAC TCGAATGCTA CTTCACATAA ATGGGCTTTT GGAGCAATCG CAGAGCTACT TGACAATGCG GTTGACGAGG TCCAAAACGG AGCCACCTTT GTCAAGATTG ATAAGATCAA TATTGTTAAA GATAATACCC CTGCTTTAGT TTTCCAAGAT AATGGTGGTG GGATGGATCC CAATGGGATC AGAAAATGCA TGAGCTTAGG CTACTCGTCA AAGAAGTCTA ATACGACGAT TGGACAGTAT GGAAATGGTT TTAAGACGAG TACCATGAGA CTTGGAGCTG ATGCCATCGT GTTTAGTCGC TCAACTCGTG GAGGCAAATC TACACAGAGC ATTGGTCTTC TGTCTTACAC ATTCCTTAGG AAAACTGGTC AGGATGATGT GATCGTTCCT ATGATTGATT TCGATATATC CAGTGTTAGG CCCCAACCAA TTATTTATGG GTCTCCCGGA GATTGGTCTA CCAACCTTAA CATTCTTCTC AAATGGTCCC CGTTTCCAAC TATGGACGAA CTTTTGCAGC AGTTCGAGGA TATTGGAACT CACGGAACAA AAGTAATTAT ATACAACTTG TGGCTTAATG ATGAAGGAAT CTATGAATTG AGTTTTGACG ACGATGATGA GGATATACGG CTCCGAGATG AGAATGCCCA GGATGGGAAA CGGTTGTACG CTAAAACATT GGAACTAAGA TCTCATATTT CATACCGCTA TCGACATTCG CTAAGGGCCT ACATTTCCAT GCTATATCTC AAGAAGTTCA AAAACTTCAA AATTATTCTT CGGGGAATCC CTGTGGAGCA ATTCAACATT GCTGATGAAT TCAGACATCC TGAGATAATA ATGTACAAAC CCCAAGCAGC TGCAATGGAA TATGCTGCCA CTGGAATTAA AGTTGGATTC ATCAAGGAGG CGCCTAAACT TCCAATTTGT GGTTTCAATG TCTATCACAA AAACCGTCTC ATCCGGCCAT TCTGGAAGGT CGTTCTGGAA GGATCAACGA GAGGCAATGG TGTTGTGGGA GTTCTTGAAG CAAACTTCAT AGAACCAGCC CACGATAAGC AAGATTTTGA GAGATCTTCT CTATTTCTGC GGCTGGAGGG GAGGCTGAAA AGGATTATCT CTGATTACTG GCAAAGCCAC TGCCACGTTT TCGGATACCA AACTGGTCAA ATCCCTGCAG ATAGGTCGAA AAGGATAGCA ATACCTGATC AACCGCCTAC TGTCAGTACA TTCAATCCTT CGCCTTTGCC TTCTGATAAA ATTAGTCAAG GCGGTCCTAT AATACGTGAA ATCAATCTTA GTAACGCCAC TTCAAGCCGT ACAGTTGCTG TTGCAGCACC GCATTTGAGA AATTCCACGG GTTTAAGAAG TAACTTCCAA CCCGTGCAGC TCAACCCACA ACCTGCAGCT GCCGATACTG GAAACAACAT CGTTGGCAAG TCAGCTGATG AGATAAGGGA AGAGAACATA CAACTCTTCA TGAGGTGCGA GGAATATATA AAGAAAGAGA ATGAAATAGA ACAGACGGTA AAGAGCTTAG AAAAGGAACT GGAAGAAGTT AAAAGTAAAT GTGCACAACT TGCTTTGCTT GTGGACGCTA AGAAGAAGGA GATGCAACAA GTTTAG 
Length1896
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1773917.. 1777501
Download Sequence
A.thaliana
AGI-codeAT4G36290.1
Descriptioncompromised recognition of TCV 1
TAIR curator summaryR-protein-interacting protein that localizes to endosomes and functions in resistance gene–mediated immunity.
Alias[AtMORC1][CRT1][MORC1][compromised recognition of TCV 1][Microchidia 1]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg484970 Ribonuclease P protein subunit P38-related
14.4222 Ahg480195 ARM repeat superfamily protein
17.088 Ahg939541 mRNA capping enzyme family protein
18.1659 Ahg485637 RNA-binding (RRM/RBD/RNP motifs) family protein
22.9129 Ahg479629 RNA-binding (RRM/RBD/RNP motifs) family protein
26.8701 Ahg919579 Endomembrane protein 70 protein family
27.6767 Ahg910238 callose synthase 1
30.8545 Ahg489227 long chain base2
34.8712 Ahg491740 Protein of unknown function (DUF630 and DUF632)
43.7493 Ahg481704 ABC-2 type transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression