Detail



ID : Ahg939971

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939971|scaffold_600515.1
Sequence
GAGAGGCAGC GGCGGCCGTC ATGGATTCAT CGGCGAACAT AAACAAAGCT TTAACGGAGA CGCGTTTCTC CGACCTCGAA CCTCCACTCT CCGGAGATAT CATTGAGGCG CTTAATCAGT CTGATTTCGA GTTCTGCACT CCGGTTCAAG CCGCGACGAT TCCTTTACTC TGTAGTTACA AGGATGTTGC CGTCGACGCT GCCACCGGTT CTGGAAAAAC CCTAGCTTTC GTCGTCCCTC TCGTTGAAAT CCTCCGTCGA TCCACCTCAT TCCCTCCGAA GCCTCATCAG GTCATGGGGG TGATTATATC GCCAACAAGA GAGCTATCGA CGCAGATATA TAATGTGGCA CAACCATTTG TTTCGACTTT GGCAAATGTG AACTCTGTGT TACTTGTTGG AGGCCGAGAG GTGAAAGCTG ACACGAAGAT TATTGAAGAA GAAGGATGCA ATCTCTTGAT TGGTACACCT GGAAGGCTTT CAGATATAAT GGAACGAATG GAGATTCTCG ATTTTCGAAA TCTTGAGATT CTTATCTTAG ACGAGGCTGA TAGGCTTTTG GAGATGGGGT TCCAAAGGCA GGTGAATTAC ATTATCTCAC GCTTGCCAAA GCAGAGGAGG ACTGGTCTCT TTTCAGCTAC ACAAACAGAG GGCGTTGAAG AGCTCGCCAA GGCTGGACTT AGGAACCCTG TGAGAGTTGA AGTTCGAGCT GAGGCGAAGT CGGAATCTTC CCAGCAATTT ACAAACTCGA AAACCCCTTC TGGTCTTCAT CTTGAGTATA TCGAATGCGA AGCAGATAAG AAATCATCAC AACTAGTGGA TCTCCTCATC AAGAACAGTG ATAAAAAGCT TATAGTATTC TTCATGACCT GTGCTTCTGT TGACTACTGG GGACTCGTAC TTTCAAAAAT TCCTGCCCTG AAGTCTATAT CTTTAATTCC TATCCATGGG GATATGAAGC AGAATGCAAG AGACAAGGCA TTAGCTTCGT TTACTAAAGC ATCAAGCGGT GCCCTTCTGT GCACAGACGT TGCTGCACGT GGACTTGATA TTCCAGGCAT TGATTATGTA GTTCAGTATG ATCCCCCACA AGACCCAAAT ATGTTCAACC ACAGGGCCGG CAGAACTGCA AGATTGGGAA GACTAGGGAA GGCCATTGTG TTTTTACTGC CTAAGGAGGA AGCCTATGTA GAGTTTATGC GCATAAGAAG AGTCCCTCTG GAAGAGAGAA AATGCTCTGA GGACGCATCC GATGTCATCC CGATCATACG TTCAGCTGCC ATGAAGGACC GAGCAGTGTT GGAGAAGGGA TTAAAGGCAT TTGTTTCTTT TGTCCGTGCT TATAAGGAGC ATCACTGCTC TTTCATTTTC AGATGGAAAG AACTTGAAAT TGGAGAGTTA GCCATGGGAT ATGGCCTCTT GTATCTTCCT TCAATGTCTG AAGTTAAACA ACACAGACTT TCCAGTGAGG GTTTCACACC TGTTGAAGGT GTCAAGTTTG ACGAAATAAA ATTCAAGGAC AAATCTCGGG AGAAACAAAG ACAGCAAAAC TTACAAGTAA GGAAAGAGAA ACGGCAAGAA GAGAAAAGAG AGAAAGGCAA GAGAAAAAGG GTTGATGCTC CTACTACTAA TGATCCTAAG AAAGCGTCGA GAAAGTTAAC AGGGAAGCAA AGACAAACTA TTCAAACTGC TGAAGATGAA GAAGTGATGG ATCGAGATTA TAAGTTAATG ATAAAAGTAA AGAAAGGGTT AATTAAAGAA GATGAATATG AAAGACTTAC AGGAGATGAT GATTTATTCT GATGAGAAGA AACAAACCTG CA 
Length1822
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1913614.. 1916559
Download Sequence
A.thaliana
AGI-codeAT5G05450.1
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.64575 Ahg488142
3 Ahg472541 COP9 signalosome 5A
4.24264 Ahg482372 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
9.16515 Ahg494293 RNA-binding (RRM/RBD/RNP motifs) family protein
11.3137 Ahg480561 Transducin family protein / WD-40 repeat family protein
12.6491 Ahg487234 Protein of unknown function DUF455
15.1658 Ahg490606
18.303 Ahg324562 AT hook motif DNA-binding family protein
21.7256 Ahg946922 acylaminoacyl-peptidase-related
22.0454 Ahg935945 indeterminate(ID)-domain 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression