Detail



ID : Ahg494293

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494293|fgenesh2_kg.8__109__AT5G46840.1
Sequence
CTCTCTCTCT CTCTTCCTCT TCTCTCATTG AAATCGGACG ACGATGGGGA AGAAGAAGTC GAAGGAAACG GAGACGGAAT CTCTAAACGA TGAATCTCAG ACCAAATCAG GCATCTTCTC TACTCTCTTC TCCGGCGAGG TTGCTAAAGG CGAAACTTCT GGCTTTGCGA GTCTCTTCTC CGATGATAAC CCTTTCCGGC GAAAAAAACC TCAAGAAATC AAAGAGTCGT CAAGTCCCGA TGAGAAGAAA GGGGATAAAC GAAATGCAGA GAACGAAGAA GGAGAAGAAA CAGTTTTGCC TGTGAAGACG AAGAAATCTA AAAAGGAGAA AAAACTTACA GATTCCGGCG ACGATGGTGT TGAGAAAGAG ACGAATTTGG ATGTTGTAGA AGAAACTGGG TTGGATTCAA AGAGGAAGAA AAGGAAGAGA GATGAGATTG AGAACGAATA CGAGACGAAG AAGTATGGAA GCGTTGAGAA GAAGAAGGTT GGTGAGAAGA GGAAGAAAGC TGATGAAGTA GCTGATACAA TGGTTTCAAA GGAAGGTTTT GATGATGAGA GTAAGCTTCT TAGAACTGTT TTCGTTGGGA ATTTGCCATT GAAGGTTAAG AAAAAAGTCA TCTTGAAGGA ATTTAGTAAA TTCGGTGAGG TTGAATCTGT GAGGATACGC TCTGTGCCAA TTGTCGATTC GAAGAGGACA AGGAAAGGAG CTATTATGTT GAAACAAATC AATGAGAAAG CTTCAAGTGT TCATGCTTAT GTTGTGTTTG AAACAGAGCA ATCTGCTGAG GCTTCTCTGG CTCATAACAT GTCTCTGATT GATGGGAATC ATGTCCGCGT TGATAGAGCA TGTCCGCCTC GTAAGAAACA GAAAGGTCAG GATGATACTC ATTTGTATGA TCCTAAGAGG ACAGTCTTTA TGGGTAATCT CCCTTTTGAT GTGAAGGACG AGGAAGTGTA TCAACTGTTT ACGGGTAAGA GTAATCTGGA GAACAGTATA GAAGCTGTTC GTGTTATTAG AGATCCTCAC TTGAACATTG GGAAAGGAAT AGCTTACGTC TTGTTTAAAA CACGGGAAGC TGCAAATCTC GTAATCAAGA AAGGATATTT GAAGCTTAGA GAAAGAGAGT TACGGATTTC TCGAGTCAAA CCTGATGCAA CGCCATCAAA GAGAAAGAGC AATCCTTCTG AAGCTTACTC GCCGGCCCAG AAAAGACTGC AAAAGGACAA AGTGGTCACA CCAACTCCTA CGGGGAAGGC TAATCTTTCA TATCAAGGTG TAAGAGCTTC AAAATCTGGT GATGATAAGA AGAATCCTTA TCAGAAAAGC CCCGCACAGG CAAAGATGAG ACCTAGAGGT AGCAGCAGCA ATGAAGACAA CAAAAAATCT GGGAATAATA GTGCTTTGAA GCAGCGAAGT CAGAAGCGGC CAGCGGTTGC AGCAAGAAAG GCGAAAGCAA ACTCAAAAGG TTCGAAAGAG AGCGGTGGTA AGCGATTTGC AGGGACTAAG CGTAAACAAG AAAACCGAAC GCCTGAAAGC TTCTCTAAGA AGAAGAAAAC AAAACGGTTT TAGGCGGTTT CTTTCAACCA TAATGGTGAA CCTCTTTCAT CTTCCTTAGT TTTGATACTA GTTGATATAC TGTAATGTTG CAACAATTAT GATTTCGTGC AAGTTTAAAA GGAAA 
Length1685
Protein Sequence
Protein Residue
Map Locationscaffold_8: 665096.. 667252
Download Sequence
A.thaliana
AGI-codeAT5G46840.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.47214 Ahg922444 D111/G-patch domain-containing protein
4.89898 Ahg482091 ARM repeat superfamily protein
5.09902 Ahg344464 Structural maintenance of chromosomes (SMC) family protein
8.12404 Ahg933960 P-loop containing nucleoside triphosphate hydrolases superfamily protein
9.16515 Ahg939971 P-loop containing nucleoside triphosphate hydrolases superfamily protein
9.69536 Ahg479083 mitotic phosphoprotein N' end (MPPN) family protein
10.583 Ahg359344
14.0712 Ahg923761 NUP50 (Nucleoporin 50 kDa) protein
14.4222 Ahg331395 zinc knuckle (CCHC-type) family protein
16.7332 Ahg929072 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression