Detail



ID : Ahg488142

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488142|fgenesh2_kg.6__1276__AT5G13260.1
Sequence
CAAGAAGAAG AAGATCTAGG TCTTGCATCT CTCTCTTCAT TACAATGGAG CGAGCACGAA CCGAAAGCCC TAGCTACTTC CGTCAATGGA GCGGCGATTC AGGTTCCACC AATGCCGCCG CCGTAGCTCC TTCTTCTCCG GCGCGTCATC ACCACGCTCG ATCTTCTTCC GTCACTAATA TGTCTAACGT CAAACGAGCT CAAAACGTCG CTGCTAAAGC CGCTGCTCAA AGACTTGCTA AAGTCATGGC TTCACAGACC AACAATGATG ACGACGATGA CGATGATGAT GATGAAATCG GTGGTGATGA TTTAGGTTTC CGATATGGTG CTCCTCCTCC TCTTTCCTTC ACTAGAAATC CTTCTTCCAC AATTGCTAAA CCTAAACCTG TTGCTTCTGC TGTTGCTGTT CCTCCTCCCA AGATCTCTAG ATCTTCCTCT CCTGCGAACT CCCCAGCCGT GTCTGTTCGG GCATCGCAGC CGCCTGTTCC GCCGAGTAAA CTGTCTCAAA GGCATCAAAC TACCAATCCA TCACCGGTTG CAACTCCTAA GACTGAAAAG AGGGTTTTAG CTGATATTGG TCATTTTAAT GGAAATGATT CGAGAGATCA GCACGAAGCA TCCGCACTTC GTGATGAACT TGATATGCTG CAAGAGGAGA ATGACAGTAT TCTTGAAAAG CTTAGGCTTG AGGATGAGAG ATGCAAGGAA GCAGAAGCCA GGGTGAGAGA GCTTGAAAAA CAGGTAACTT CTCTGGGAGA AGGTGTATCA TTGGAAGCTA AACTTCTGAG CCGAAAAGAA GCTGCTTTGC GTCAAAGAGA GGCGGCCCTC AAAGATGCAA GGCAGAATAG AGATGGGACT AATAAAGAGA CTACTGTTCT TCGGTCTCAA GTAGAGAATG CAAAACTCGA GACCGCTGGT ATAGTAGCAC AACTTCAAGG AGCAGAATCT GAAGTCAACG CTCTACGGAC AATGACGCAT AGAATGATAT TGACCCAAAA AGAGATGGAG GAAGTTGTTC TTAAACGGTG CTGGCTAGCT CGGTATTGGG GTTTGGCTGC CAGATATGGC ATATGTTCGG ATATTGCTAC ATCGAAGTAC GAATACTGGT CATCTCTGGC ACCTCTTCCT TTTGAAATTG TGCTGTCAGC TGGGCAGAAG GCTAAAGAAG AAAGTTGGGA AAAAGAATCT GAGGAGAACG AGAAGAGGAG CCAGCTCGCT CAAGATATAA ATGATCTAAC AGGAGAGGGA AATATTGAAA GTATGCTCTC TGTGGAAATG GGTCTAAAGG AGCTAACTTC TTTGAAGGTT GAAATTGCCA TTACTATTAC ATTAGCCCAG CTAAGGTTGG CCAATACTAC TCGGCTGTCT GATATCGAGT TAAAATCACC AGGTGGTCCT AAGATTACGG AGGCCCTTGA ATTGAGTCAA GAAGAGTCTG AGGATGTTCT CTTCAAGGAG GCTTGGCTCA CGTACTTCTG GAGAAGAGCA CAATCCCTTG GCATAGAAGT GGACATTGCG AGAGAACGTC TTAGATTCTG GATCAGCAGG AGCGCACACT CTCCATCTTC ACATGACGCC ATGGAAGTTG AACAAGGTCT AACAGAGCTA AGAAAGCTGC GGATAGAACG TAGATTGTGG GAAGCCTCTA GGTCCAGCCA GTAAGTAGTG ACCTTGGGGA CCTCAAGATC CCAGAGCAGT CATGTTACCA CATCTTTAAC AGTACTGTAT ATCGTACATG CTTTCTTCCT CTGTGGTTCA TGTACTTTGC AGTCAGAAAA ATGTTTAATC CAGTTTTGTG AACCGAAGAA TTGTATTACA CGCACTACTT TTGACATATA ATATATCCAC GTTTCCACGT 
Length1860
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5147095.. 5150853
Download Sequence
A.thaliana
AGI-codeAT5G13260.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.64575 Ahg939971 P-loop containing nucleoside triphosphate hydrolases superfamily protein
6.32456 Ahg473976 root hair initiation protein root hairless 1 (RHL1)
10.0995 Ahg949102 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
26.8328 Ahg474628 Sec14p-like phosphatidylinositol transfer family protein
29.4958 Ahg492998 SCAR family protein
29.6648 Ahg935391 Phosphoribosyltransferase family protein
30.9839 Ahg947562 RING/U-box superfamily protein
31.1769 Ahg944578 K+ uptake permease 5
34.176 Ahg929675 nuclear RNA polymerase D2B
34.2053 Ahg489516 Uncharacterized protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression