| Annotation |
|---|
| Description | jgi|Araly1|940081|scaffold_600625.1 |
| Sequence |
GTTTTAGGTA ATTGAGTAAG AACAATGAAA GCCTTGTTTC GATTCAAGTC TTGCTTGTTT GATCCAACAC GAAGAAGGAA CCCACTCGTT TCTTTCTCAG GTTTCTCAAA GTCATCTAAA TCTAATAAAA CCCGTGAGAC CACCCCATCG AAGATCCAGT CAGAAGCTAC TGCAATCACC TCACTTTTCA ACGAGATTAC TGATATTTTA GGATCGGATG TTGTCCAAAC AGATGAGACT ACGCGGCTCA GAGCCCATGT GTCAGCACCT GTGTGTGATA ATGGAGCATT GGTTTCTTGC ACGCAAGGTG TTCGTGAAAA TGCTGCAATG GGATTTTCAG GTGAGAATGA AGAGGCTCAG AAAGGTCTTC TTGAAGAAGT TGACTTCAGC CCCGTGGTTC ATCAGATTAC GAGTGTCGTT AGGGCAGATG ATGAAATAGT TTCCATGGAG GACAGGTTAG AGATATTGAG TTTTCGGTTT GAACCCGAAA TAGTGGAGAA TGTACTGAAG AGGTGCTTCA AGGTTCCTCA TTTGGCTATG AGGTTCTTTA ATTGGGTGAA ACACAAGGAT GGTTTTTCGC ATAGAGTCGG AATTTACAAC ACCGTGCTTA GCATGGCTGG GGAAGCGAGA AATCTCGATA TGGTAGACGA ATTGGTGAAA GAAATGGAGA AGCACGCTTG TGATAAGGAT ATCAGGACGT GGACTATTCT TATCCCAGTG TACGGGAAAG CAAAAAAGAT TGGAAAAGGT CTGCTCGTTT TTGAGAAGAT GAGGAAAAGT GGCTTCGAAC TTGATGCTGC GGCTTACAAT ATCATGATTA GGTCCCTATG CATCGCTGGT AGAGGTGATC TTGCGCTTGA ATTCTATAAA GAAATGATGG AAAAGGGTAT CACTTTTGGA TTGAGAACGT ACAAGATGTT ACTAGATTGC ATAGCGAAAT CAGAGAAAGT TGATGTAGTC CAGTCCATTG CAGATGACAT GGTTAGGATA TGTGAGATAT CAGAACATGA TGCTTTTGGT TATTTGCTCA AGAGTTTTTG TGTTTCCGGT AAGATAAAAG AAGCTCTAGA ACTGATCCGC GAGCTAAAAA ACAAGGAAAT GTGCCTCGAC GCCAAGTATT TTGAGATTTT GGTTAAAGGA CTTTGTAGAG CTAATAGAAT GGTAGATGCT CTAGAGATTG TTGATATAAT GAAGAGAAGG AAACTGGATG ACTCAAATGT CTATGGGATC ATCATCAATG GGTATCTCAG GCAAAACGAT GTTTCAAAAG CACTTGAACA GTTTGAAATT ATTAAAAAAT CAGGGCGTCC ACCTAGAGTT TCTACATACA CTGAGATTAT GCAACACCTC TTCAAGTTGA AACAGTTTGA AAATGGTTGC AACTTATTCA GTGAGATGAT AGAGAGCGGG ATTGAGCCTG ACAGCGTTGC TATCACAGCC GTGGTTGCTG GTCATTTGGG CCAAAACCGA GTAGCAGAGG CATGGGAGGT GTTTGGCAGC ATGGAGGAAA AGGGCATCAA ACCTACATGG AAATCGTATT CGATATTTAT GAAAGAGCTC TGTAGATCAT CAAGATATGA TGAGATCATT ACGCTATTCA ATCAAATGCA CGCCTCCAAG ATAGCTATCA GAGATGATAT TTTTTCTTGG GTTATCTCTA GTATGGAAAA AAATGGTGAA AAGGAGAAGA TTGATCTTAT CAAAGAAATC CAGAAACAAT GCAATGCCTA TAATCAAGAA CTAAACGGAT CTGGCAAAGC AGAATTTATG CAAAAAGAGC TCGTTAATAA GTATAATCGT CCACAGGTAG TGCAGCAGTC AGCTCTTCCA CCAGCTTCAT CTGCTGTTGA TAAAATGGAT GTGCAAGAAA TTTGTCATGT GTTATCATCC TCCCGAGATT GGGAGAGAAC ACAAGAAGCT CTAGAAAAAT TGACAGTCCA GTTCACACCA GAACTGGTAG TTGAGGTTCT ACGTAATGCC AAGATACAAG GCAACGCTGT TTTACGTTTC TTTTCATGGG TGGGAAAGAG AAATGGCTAT AAGCACAATT CAGAGGCATA CAACATGAGC ATCAAAGTTG CAGGATGTGG GAAAGATTTT AAGCAGATGA GAAGTCTGTT TTACGAGATG AGAAGACAAG GCTGCTTGAT AACACAAGAT ACTTGGGCAA TCATGATAAT GCAGTATGGT AGAACCGGTC TTACCAACAT TGCTATTAGA ACGTTCAAGC AAATGAAAGA TATGGGTCTG ATCCCGAGCT CTTCGACCTT CAAGTGTTTA ATCACAGTTC TTTGTGAGAA GAAAGGCAGG AACGTTGAAG AAGCCACCAA AACATTCCGC GAGATGATTC GTTCGGGTTT TGTCCCAGAT AGAGAACTAG TCCAAGACTA CTTGGGATGC TTATGTGAAG TTGGTAACAC AAAGGATGCA AAAAGTTGTT TGGATTCTCT CGGCAAGATA GGTTTCCCTG TCCCTGTGGC CTACTCAATT TACATAAGAG CTCTTTCTCG AATTGGAAAG CTAGAAGAAG CTCTATCAGA ATTAGCCAGT TTTGAAGGAG ATAGATCTTT ACTCGATCAG TATACTTATG GAAGCATTGT TCATGGTTTA TTGCAGAGAG GAGACTTACA CAAAGCACTG GATAAAGTGA ATTCCATGAA GGAAATCGGA ATAAAACCCG GTGTCCATGT CTACACATCT CTGATTGTTC ATTTCTTCAA GGAGAAACAG TTCGAGAAGG TTCTAGAGAC ATGTCATAAA ATGAAAGAAG AAAGCTGCGA ACCTTCGGTT GTTACATATA CGGCAATGAT ATGCGGATAC ATGAGCCTGG GAAAAGTGGA AGAGGCTTGG AAAGCATTCC GCAATATGGA AGAGAAAGGA ACTTCACCAG ATTTTAAAAC ATATAGTAAG TTCATAAACT GTTTGTGCCA AGCAGGCAAA TCTGAAGATG CCCTGAAGCT TCTGTCTGAG ATGCTGGATA AGGGTATTGC TCCAAGCACT ATCAATTTCC GGACAGTTTT CTACGGGTTA AACAGAGAAG GCAAGCAGGA TCTTGCCCGG ATTGTTCTAC AGAAGAAGTC TGCTTTGGTA GCACAGCGAA AGGTATCTAC ATGATCTCTC TCTCTCTCTC TCTC |
| Length | 3134 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 2320400.. 2323526 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G06400.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 14.3527 |
Ahg322516 | cleavage and polyadenylation specificity factor 73 kDa subunit-II |
| 32.9848 |
Ahg487474 | SET domain protein 38 |
| 36.4966 |
Ahg938803 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 39.95 |
Ahg921544 | Pentatricopeptide repeat (PPR) superfamily protein |
| 40.4228 |
Ahg343089 | Pentatricopeptide repeat (PPR) superfamily protein |
| 41.4246 |
Ahg896277 | RNA binding;nucleic acid binding |
| 68.8259 |
Ahg495065 | ethylene response factor 110 |
| 69.4982 |
Ahg944869 | O-Glycosyl hydrolases family 17 protein |
| 72.1665 |
Ahg470202 | Pentatricopeptide repeat (PPR) superfamily protein |
| 74.2159 |
Ahg477146 | Integrase-type DNA-binding superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|