Detail



ID : Ahg487474

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487474|fgenesh2_kg.6__608__AT5G06620.1
Sequence
CAAAAAATGT CGCGTTTTGC TTTAAATCGT TATAGTCGTT ATCTCTCGCG CCTCAAGCCA TTGAAGACGC CTCCGTTTTT CTCTTCCTCT TCTGCGTCGA ATCGAGATGG CGACTATCAG ACCGGACCGC CACCGATCCA AGTCGGACTC ACTGAGTCCG CGGGTCGAGC TGTTTTCGCA ACGCGTAGAA TTGGTGCCGG AGATCTCATA CACACGGCCA AACCCGTCGT AGCATGCCCT TCTCTTTTAA AGCTCGACTC TGTTTGCTAT CTTTGCCTCA AGAAACTCAT GGGTTCTGCT AAATTTGAAG ATCGTGGAGT CTCGTATTGT AGTCAAGAGT GCCAAGAGAA TTCAAAGGGT TTTTTGGATG TCGAAAGAAG AGCAGATTGG TCAAGTTTTG TTAATTATTG TGGGATGCAC AACTTCAAGT ACCCGCTTAT GGTCAAGAGG TTGTGTTGTA TGATAATATC AGGTGTTCTG CCCGCTGACT GTCTTGACAT ACTTCAACCA GCTGCTTTAT CATCTGAGAT GATTTCAAAG ATAGAAGACG GTTATGGTTT ATTATGGAAT GCCTTCAGGA AGGCAAATTT CAAGGATGAT GATGTTTCTT TTCTAACTAA ACAATGGTAT ACGGCTATAC TCGCCCGGAT TCGTATCAAT GCATTTCGTA TTGATCTGGT TGGAGGCTCA TGTGGCGAAG ACCTTCTGTC ACTGGCTGCA GCCTCTGTTG AAGGTGAAGG TGCAGTTGGC CATGCCGTTT ATATGTTACC ATCCTTCTAC AATCATGACT GTGATCCCAA TGCGCACATT ATATGGTTGC AGAATGCAGA TGCAAGGTTG AACACTCTAC GTGATGTCGA AGAAGGTGAA GAGCTTCGGA TATGTTATAT AGATGTAAGC ATGGGATATG AGGCGCGTCA AACAATACTC TCTCAAGGGT TTGGCTTCCT CTGCAACTGC TTACGCTGCC AGTCCGCTGA CTGA 
Length984
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2405525.. 2408277
Download Sequence
A.thaliana
AGI-codeAT5G06620.1
DescriptionSET domain protein 38
TAIR curator summary
Alias[ATXR4][SDG38][SET domain protein 38]
Gene coexpression
MR
MR Locus Description
18.5203 Ahg480561 Transducin family protein / WD-40 repeat family protein
19.0526 Ahg903223
21.9089 Ahg897788 Metal-dependent protein hydrolase
22.9783 Ahg323555 Tetratricopeptide repeat (TPR)-like superfamily protein
25.2587 Ahg935438 Pentatricopeptide repeat (PPR-like) superfamily protein
25.4558 Ahg476896
25.6905 Ahg480422 Pentatricopeptide repeat (PPR) superfamily protein
27.3861 Ahg910238 callose synthase 1
29.3939 Ahg940793 Pentatricopeptide repeat (PPR) superfamily protein
29.95 Ahg344958 DNA repair-recombination protein (RAD50)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression