Detail


ID : Ahg940115

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940115|scaffold_600659.1
Sequence
TCTTATTTTC TTCGTAAGAG ATGGAACTAG CGTTGTCTCT AGGCGACAAT ACTAAGAAAC AGTTATCTTT TGTGGAGATG AACTCGAAGA TTAATAATCC CTCTGCCTCG TCGACCTCAA CTTCCGACAA GGATCTTGGG TTCTGCATGG GTTTAGATGT TGCTTTTGGT GGTCACAAAT CGTTGTCATC CTCTTCGTCT CCGCCGGTAG AAGATGAGAA GAAGAAACCG GTGCCGAGAG CAGAAAATTC TGATGGAATT AGGGTTTCGT CTCCAGTAGA TCCACCACTA CAGCTTCAGC TTCACTTACC TAATTGGCTC CCTGAGAACA GTAAGGGTCC ACAAGGAGGA CGAATGCTCT CAGGAGCAGC TATGGTTGCA GAGGAGGAAG AGGAGGAGGA GGAAGTGGTG CCTAGTATGT CAGTATCGCC GCCGGATAGC GTAACGTCGT CGTTTCAATT GGACTTTGGG ATCAAAAGTT ATGGTTACGA GAGAAGAAGC AATAAGAGAG ATATTGATGA TGAAGTGGAG AGATCTGCTT CAAGAGCCAG CAATGAAGAC AACGATGAAG AAAATGGATC CACTAGGAAG AAACTTAGAC TCTCTAAAGA CCAATCTGCT TTTCTTGAAG ACAGTTTCAA AGAACACAGT ACCCTTAATC CTAAACAGAA GATTGCGTTG GCAAAGCAGT TGAATCTTCG TCCTCGTCAG GTTGAAGTTT GGTTTCAAAA CAGACGAGCC AGGACAAAAC TGAAGCAAAC GGAAGTGGAC TGTGAATACC TAAAGAGATG CTGTGAGTCA CTAACCGAAG AAAACCGGAG GCTTCAAAAA GAGGTTAAAG AATTGAGAAC CTTGAAGACT TCCACACCCT TCTACATGCA ACTTCCGGCC ACAACTCTCA CTATGTGCCC TTCTTGCGAA CGTGTTGCCA CTTCAGCAGC ACAGCCGGCC ACGTCAGCTG CCCACAACCT CGGTTTGTCC ACGTCATCAT TGATTCCGGT TAAGCATCGG CCGGTACAAA CAAGTCTCAT GAAAGCACGT GTGCCCAAGT AAAAATCGTT ACAGTTTGAG CA
Length1072
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2437164.. 2439160
Download Sequence
A.thaliana
AGI-codeAT5G06710.1
Descriptionhomeobox from Arabidopsis thaliana
TAIR curator summaryHomeobox-leucine zipper protein.
Alias[HAT14][homeobox from Arabidopsis thaliana]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg482574 E2F transcription factor 3
20.6882 Ahg485165 RHO-related protein from plants 10
24.6171 Ahg920943 Regulator of chromosome condensation (RCC1) family protein
31.4166 Ahg924683 nuclear RNA polymerase D1A
35.1994 Ahg496458 P-loop containing nucleoside triphosphate hydrolases superfamily protein
36.3318 Ahg472300 DNA-binding bromodomain-containing protein
37.1483 Ahg344719 CCCH-type zinc fingerfamily protein with RNA-binding domain
45.7602 Ahg319380 Nucleic acid-binding, OB-fold-like protein
49.4975 Ahg918566 RADIATION SENSITIVE 17
60.597 Ahg313471
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression