| Annotation |
|---|
| Description | jgi|Araly1|924683|scaffold_200244.1 |
| Sequence |
CTTGTAGGAA TCTCTTCGAC ATGGAAGACG ATTGCGAGGA GCTTCAGGTT CCCGTGGGAA CTCTAACTTC GATAGGTTTT AGCATTTCAA ATAACACTGA TCGAGATACA ATGTCTGTCA TAAAGGTTGA AGCACCGAAT CAGGTGACTG ATTCTCGGCT AGGGCTACCG AATCCGGATT CTATCTGCAA AACCTGTGGC AGCAAAGATC GAAAAGTTTG CGAAGGGCAT TTCGGGGTTA TAAACTTCCA GTACTCGATA ATAAACCCGT ATTTCCTCAA GGAGATAGCT GCGTTGTTAA ACAAAATCTG TCCGGGTTGT AAATACATTC GAAAAAAGCA GTTTCAGATT ACCGAAGACC AGCCTGAGAG ATGTAGATAT TGCACTTCGA ATACCGGTTA TCCTCTAATG AAGTTTAGAG TAACTACTAA AGAAGTCTTC AGGCGATCCG GAATCGTTGT TGAAGTAAAC GAAGAGAGTC TGATGAAACT CAAGAAACGG GGAGTGTTAG CATTGCCTCC TGACTATTGG AGTTTTGTGC CACAAGACTC CAATATCGAC GAGAGCTGTT TGAAACCAAC AAGGCGGATA CTAACGCATG CACAGGTTTA TGCTCTGCTA TCTGGGATTG ATCAGAGACT CATCAAGAAG GATATCCCCA TGTTCGACTC TCTTGCTCTG ACATCTTTTC CTGTTACACC AAACGGTTAC CGTGTAACCG AAATAGTTCA TCAGTTCAAT GGAGCTCGAC TAGTATTTGA TGAACGGACT CGGATATACA GGAAACTAGT CGGCTTTGAG GGAAACACGC TTGAATTGAG TTCTCGCGTG ATTGAATGCA TGCAATATTC CAGACTCTTT TCGGAAAATG TGTCTTCGAG TCAAGATTCC GCAAATCCAT ACCAAAAGAA GTCTGATACA CCAAAACTGT GCGGTCTAAG GTTCATGAAG GACGTGCTGC TCGGTAAAAG AAGCGATCAT ACATTCCGGA CAGTAGTTGT TGGTGATCCG TCCTTGAAGC TTCATGAGAT TGGCATACCC GAGCGTATCG CAAAAAGGCT TCAAGTATCA GAGCATCTCA ACAACTGGAA CAACGAACGG CTAGTCACTT TCTGTTCCCC CAACCTGTTC GATAATAAAG AGGTGCATGT GAGAAGAGGA GATAGATTGG TGGCTATTCG AGTCAGTGAC CTCCAAACCG GAGACAAAAT ATTCCGGAAT TTAATGGATG GAGACACAGT GCTGATGAAC AGACCGCCTT CGATTCATCA GCATTCGCTT ATTGCAATGA CAGTTAGAGT CCTCCCAACG ACTTCTGTTG TCTCCTTGAA TCCGATCTGC TGTTTGCCGT TTCGTGGTGA TTTTGATGGA GATTGTCTTC ACGGTTACGT TCCTCAGTCC ATTCAAGCAA AGGTCGAGCT TGATGAGCTT GTTGCTTTGG ATAAGCAGCT TATCAACCGA CAGAATGGTC GGAACTTGCT TTCCTTAGGA CAAGATAGCT TGACGGCGGC TTATCTGGTT AATGTCGAGA AGAACTGTTA TCTGAATCGA GCTCAGATGC AGCAGCTTCA AATGTACTGC CCATTTCAGC TTCCTCCGCC TGCGATTATC AAAGCTTCTC CTTCGAGCAC TGAGCCTCAA TGGACGGGAA TGCAGCTATT CGGGATGCTG TTTCCTCCCG GGTTTGACTA CACTTACCCT CTGAATGATG TGGTTGTGAG TAACGGAGAA CTTTTGTCTT TCTCTGAAGG ATCTGCTTGG CTCCGAGATG GAGAAGGTAA TTTCATCCAG GGATTGATCA AACACGACAA AAGGAAAGTT CTTGATATCA TCTATTCCGC TCAAGAAATG CTATCTCAGT GGTTGCTGAT GCGCGGATTG AGTGTTTCCT TGGCGGATTT GTACCTTTCC TCTGATCCGC AGTCTCGTAA AAACTTGACT GAAGAGATAT CATACGGATT ACGGGAAGCT GAGCAAGTCT GCAACAAGCA ACAGCTAATG GTTGAATCTT GGAGAGATTT CCTTGCAGTT AATGGGGAGG ATGAGGGAGA GGATTCAGTT GCGGGGGATT TGGCCCGGTT CTGCTATGAG AGACAAAAAT CCGCTACATT AAGCAAAATT GCAGTTAGTG CTTTTAAGGA TGCTTGCAGA GATGTTCAGG CACTAGCATA TAGGTATGGC GATCAATCCA ACTCTTTTTT GATCATGTCA AAAGCCGGTA GCAAAGGGAA TATCGGGAAG CTGGTTCAAC ACAGCATGTG TATCGGTCTG CAGAATTCGG CAGTTTCTTT GTCCTATGGG TTTCCGCGTG AGCTGACTTG CGCTTCTTGG AATGACCCGA ACAGTCCACT TCGTGGCGCA AAGGGAGAAG ACAGTACCGC TACTGAGTCA TATGTTCCTT ATGGAGTCAT TGAGAACTCG TTTCTAACGG GTCTGAATCC GTTGGAATCT TTTGTTCATT CAGTTACAAG TCGTGACAGC TCATTCAGTG GTAATGCTGA TCTCCCCGGG ACACTGAGCA GAAGATTAAT GTTCTTCATG CGGGACATAT ACGCTGCTTA TGATGGCACA GTGAGAAATT CTTTCGGAAA CCAGTTAGTC CAGTTTACTT ATGAGACTGA TGGTCCCGTT GAAGATATCA CCGGTGAAGC ACTTGGCTCA CTTTCTGCTT GTGCATTATC TGAGGCAGCT TACAGCGCGC TGGACCAGCC AATCAGCCTT CTGGAAACTT CGCCGCTTCT GAATCTTAAG AATGTCTTGG AGTGTGGATC GAAGAAAGGT CAAAGAGAAC AGACTATGAC TTTGTATTTG TCTGAAACCC TTTCAAAGAA AAAGCACGGG TTCGAATACG GGTCACTGGA GATCAAGAAC CACTTGGAGA AACTAAGTTT CTCTGAGATC GTTTCAACAT CTATGATAAT ATTCTCTCCA AGTACTAACA CGAAAGTACC GTTAAGCCCG TGGGTTTGCC ATTTTCATAT CTCTGAGAAA GTACTGAAGC GGAAACAACT CAACGTAGAA TCCGTGGTTT CTTCATTAAA CGAGCAGTAC AAGAGCAGGA ACAGAGAACT GAAGCTTGAT ATAGTTGATT TAGATATACA AAGCACAAAC CACTGCTCTT CAGACGATGA GGCAATGAAG GATGATAGCT TTTGCATCAC GGTGACTGTA ATCGAAGCCT CAAAGCACTC GGTTTTGGAA CTGGATGCTA TTCGTCTCGT TTTGATCCCT TTTCTTCTTG ACTCTCCTGT CAAAGGTTCT CAAGAGATTA AAAAGGTGGA TATCTTATGG ACAGACCGAC CAAAAGCGCC AAAAAGGAAC GGGGACCATT TGGCGGGTGA GCTGTACTTA AGGGTTACAA TGTATGGAGA TCGGGGAAAA AGAAACTGTT GGACCGCTCT TTTAGAAACC TGTCTTCCCA TTATGGATAT GATTGACTGG AGCCGAAGCC ATCCTGATAA TATCCGACAA TGCTGCTCGG TTTATGGAAT AGACGCTGGA CGGAGCATTT TCATAGCAAA TTTGGAGTCC GCGGTGTCAG ATACCGGTAA GACGATACTA AAAGAGCATC TGCTTCTCGT AGCTGACAGT CTCTCTGTTA CCGGAGAATT TGTGGCATTA AACGCCAAAG GTTGGAGTAA ACAAAGACAG GTCGAGTCCA CGCCTGCACC TTTTACTCAA GCATGCTTTT CGAGCCCAAG TCAATGCTTT CTCAAAGCTG CTAAGGAAGG TGTTAGAGAC GATCTTCAAG GGTCTATCGA CGCGCTAGCT TGGGGAAAAG TTCCTGGTTT TGGAACTGGA GATCAGTTTG AAATCATCAT TTCGCCAAAG GTTCACGGGT TTACTACACC GGTAAATGTG TATGACCTTC TGAGTAGTAC ACCTCCAAAG ACAAACTCTG CGCCTAAATC AGACAAAGTC ACGGTCCAGC CATTCGACTT GCTAGGTACC GCATTCCTGA AAGGTATCAA GGTACTCGAT GGGAAAGGGA TTTCTATGTC ACGGCTTAGA ACGATCTTTA CATGGGAAAA CATCGAGAAG CTTTCCCAGT CACTGAAACG CATACTCACC AGTTACGAGA TCAATGATCC ATTGAATGGG AGGGACGAAG AACTTGTGAT GATGGTTCTG CACTTGCACC CCAACAGAGC TGAGAAAATT GGACCAGGCC TTAAAGGAAT CCGGGTCGCT AAATCGAAGC ACGGAGATTC TCGTTGCTTC GAGGTTGTAA GAATAGACGG GACATTCGAA GACTTTTCGT ACCACAAGTG TGTCTTGGGA GCAACAAAGA TCATTGCCCC AAAGAAAATG AACTTATACA AGTCAAAGTA TCTTAAAAAT GGTACACACC AGCCCGGTAG GCTCTCCGAA AACCCGCAAA CAGTCAAGTA AAAGGAAGAA AAGGACTGTC TT |
| Length | 4412 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 1176637.. 1182501 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G63020.1 |
| Description | nuclear RNA polymerase D1A |
| TAIR curator summary | Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing. |
| Alias | [NRPD1][NRPD1A][POL IVA][SDE4][SMD2][nuclear RNA polymerase D1A][NUCLEAR RNA POLYMERASE D 1A][SILENCING MOVEMENT DEFICIENT 2] |
| Gene coexpression |
|---|
| MR |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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