Detail



ID : Ahg940266

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940266|scaffold_600810.1
Sequence
AAAAAGGACA ACGTGGTTCA GATGATGAAT GAGAAGAAGA CTTTTGACGT CTCGGACTTC GTTAAGGTTT ACTTGACTAC CACAGAGGAG GAGGATTTGG ACACGCGTGG TGGAGGCTAC GTCAAATTGA TTGGGCATGA TAATATCAAA TTTGAGTTGG TTGCTTGCCA TTATCGCAAA GCAACTTGTT CAACCCTTTG CTATCTGGTA AACAAACAAG ACTCCAATGG ACGACTTAAC GCAGCTATCT GTTGTGCTCC TGCGTTGGCT CTTGGTACTT GGGGTCTACT AGAAGGCAAG AAAGCAACGG GTTACCCTGT TTTTATGGAG AAACTTGCGG CTACTTGTGA TGATCACAAG AGGGATATAA CTTTGGCTGA TGAGACAAAG AAAACTGTTG TGGTGTCCCT TTGGAATGAT CTAGCAACTG GCATAGGCCA TGAACTGCTA GACATGGCTG ATAATCACCC TGTTATCGCG ATTAAGTCTC TCAAAGTTGG AGATTTTCAA GAAGCTACAA AGTTGAAATC TTGGTATGAT GCTGAAGGGA AAGAGACATC TATGTCTGCT ATTGGCTCTG GAATGGGTTC TTCTGCCAAC AATGGATCAA GATCCATGTA TTCTGACAGA GTTTTTCTCT CTCACATCAC AAGCAACCCC TCTTTAGGTG AGGAGAAGCC TGTATTCTTT AGTACTAGAG CTTACATAAG CTTCATCAAG CCAGACCAGA CAATGTGGTA CCGTGCTTGC AAGACCTGTA ACAAGAAAGT GACTGAAGCA ATGGACTCTG GTTATTGGTG TGAAGGTTGT CTGAAAAAGG ATCAAGAATG CAGCTTAAGG TATATAATGG CGGTGAAAGT CTCTGATTCA ACAGGTGAAA CTTGGTTTTC TGCATTCAAT GATGAAGCAG AGAAGATTAT TGGCTGCACA GCTGATGAAC TCAATAATCT AAAATCAGAG GAAGGTGAAG TGAATGAGTT TCAGACAAAA CTGAAAGAAG CTACTTGGTC ATCTCATCTC TTCCGGATTA GTATAACAGT AAGAAGAGAC AGAGGATAAC TGTAAGAGGT GTTTCTCCAA TT 
Length1082
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G08020.1
DescriptionRPA70-kDa subunit B
TAIR curator summaryEncodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.
Alias[ATRPA70B][RPA70B][ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT B][RPA70-kDa subunit B]
Gene coexpression
MR
MR Locus Description
8.24621 Ahg496802 phosphoenolpyruvate carboxykinase 2
13.3041 Ahg944316
22.6936 Ahg484384 cytochrome P450, family 71, subfamily B, polypeptide 19
31.6544 Ahg943129 Copper amine oxidase family protein
31.8434 Ahg952033 Cyclase family protein
36.0555 Ahg475091 Flavin-containing monooxygenase family protein
45.2769 Ahg475258 NAD(P)-linked oxidoreductase superfamily protein
46.5403 Ahg942923 UDP-D-glucose/UDP-D-galactose 4-epimerase 5
46.8295 Ahg909878
47.4342 Ahg922187
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression