| Annotation |
|---|
| Description | jgi|Araly1|940431|scaffold_600975.1 |
| Sequence |
CATCTCTCTA ATGCCGTTAA TATGGGTGAC ACCGCTCTTA GCCTGAAGTG CCTTGGGGAC TCTGAAAACC AATTTTGTTC CGATGTTTCT ACTTTCACTG ATGATGGCTG CCGGTTAGTC CTCGGATTAG GTCCAACGTC GGCTTCATAC TGTTTTAGTG TCGGCGTTAA TAACAGCAAC AAAGATTCTG CTTCTGGATT CAGTCAAGTA CTCGCTGATT CAGTTCTGCA ACTTGGTCGT CCTGCTCCCC GAGTTGCTAT CAATAATGGT GGACAACGTG TGATCCCTGT TGTTGATGAA GGTTCTTCTT CTGCAAAGAG ATCAGGTGGA TACATGCCAT CACTTCTGTT AGATCCAACT GTTAGAAACC CTTCACAGAT GCAACAACAT AAAGATTTTG GAACCGGCAT CCATTCACAA GTGAGCCTAG AACCATCACC GTACACAGCG TTATCTGTAC AGCAGAGGAC TAGCAATCCG AGGAAGTGTA AATTTATGGG ATGTGTGAAA GGAGCCCGAG GCTCATCAGG GCTCTGCATT AGCCATGGTG GAGGCCAGAG ATGCCAAAAA CCAGGCTGCA ACAAAGGTGC AGAGAGTAAA ACCACTTTTT GCAAAACCCA TGGTGGAGGG AAGAGATGTG AACACTTGGG ATGCACGAAG AGTGCTGAAG GGAAAACAGA TTTCTGCATA TCTCATGGTG GTGGAAGACG TTGTGAGTTC CTCGAAGGAT GTGACAAAGC AGCCCGTGGC AAATCGGGCC TCTGCATTAA ACACGGTGGT GGCAAAAGAT GTAACATCGA AAGCTGTACG CGGAGTGCTG AAGGACAAGC TGGTCTTTGC ATATCCCATG GTGGTGGAAA ACGTTGTCAG TTTTTTTCAG GTTGTGAGAA AGGAGCTCAA GGAAGTACAA ACTACTGCAA AGCCCATGGA GGCGGAAAAC GCTGCATATT TTCAGGATGT AGCAAAGGAG CAGAAGGTAG TACTCCTCTG TGTAAAGCAC ACGGTGGTGG GAAACGCTGT CTGGCTGATG GAGGCGGGAT TTGCTCTAAA AGCGTACATG GTGGGACTAA CTTCTGTGTT GCTCATGGTG GTGGGAAAAG ATGTGTTGTG GCGGGGTGTA CAAAGAGTGC GCGTGGTCGC ACTGACTGTT GTGTTAAACA CGGTGGTGGA AAACGTTGCA AGATTGTCGA TTGTGAGAAG AGTGCTCAAG GTAGTACTGA TTTCTGTAAA GCTCACGGTG GTGGGAAGCG ATGTTCTTGG GGAGAAGGGA AATGTGAGAA ATTCGCTAGA GGAAAGAGCG GTTTATGCGC TGCACATAAC ACTATTATGT CTCGAGAGAA CGAAGGTGGA AGCAAGAGCG GTTTGATTGG ACCGGGACTC TTTAGTGGCC TTGTTTTTGG CTCTACTTCT GATCATTCTC AGTCTGGAGT TAGCGCTGTC TCTGATTGCA CCGATTCTGT TGATCGAACA CAGTTTGAGA ATAGGCAGAA GAATAAGAAG ATGATGATAC CGATGCAGGT TCTAGTACCT TCATCAATGA AATCTCCAAG TACTTCACAT GAAGGAGAAA CAAACATCTA TGACTTCATG ATTCCGGAGG AGAGAGTTCA CGGCGGAGGG CTAATAATGT CTTTACTTGG TGGCTCCATT GATCGAAACT GAAAGCCATT TATGGTCACC TT |
| Length | 1682 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 3671852.. 3673587 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G09672.1 |
| Description | conserved peptide upstream open reading frame 21 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF21 represents a conserved upstream opening reading frame relative to major ORF AT5G09670.1 |
| Alias | [CPuORF21][conserved peptide upstream open reading frame 21] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg930770 | Nucleic acid-binding, OB-fold-like protein |
| 12 |
Ahg483931 | fumarase 1 |
| 17.4642 |
Ahg332253 | |
| 20.4939 |
Ahg931405 | hexokinase 2 |
| 30.1993 |
Ahg496527 | Leucine-rich repeat protein kinase family protein |
| 35.7071 |
Ahg482562 | RNA helicase family protein |
| 44.2719 |
Ahg480698 | Sec1/munc18-like (SM) proteins superfamily |
| 44.9889 |
Ahg926119 | Protein phosphatase 2C family protein |
| 48.0625 |
Ahg312946 | Alba DNA/RNA-binding protein |
| 56.3205 |
Ahg471548 | ELM2 domain-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|