Detail



ID : Ahg482562

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482562|fgenesh2_kg.4__1622__AT2G35920.1
Sequence
GTTTCTCCAC GCTTCGCTTT CTCCTTCCAT TTTCTTCCAA ACTCTCTCCG CTTCCTTCTC TCTTTCACAC AGCCGCTATG CCTCCTCACG GTCCTAATTC TCAAGGTGGT CGTCGAGGTG GAGGTTTCTC CTCCGGTCGT GCTGGAGGTC GCCGTGGTGG ACGCGGCGGC GGCGGTCGTG GCGGCGGGGA ACAGCGATGG TGGGATCCGG TGTGGAGAGC TGAGCGTTTG CGTCAGCAAC AAGTTGAGAT GGAAGTTCTT GATGAGAATG AATGGTGGAA CAAGATTGAG CAATGGAAAA CAGGAGGAGA ACAAGAGTTG CTAATTAAGC GCAATTTTAG CCGTGGAGAT CAGCAAACGC TTTCGGATAT GGCTTTTCAG ATGGGTCTTT ACTTCCATGC ATACAATAAA GGGAAGGCTC TTGTAGTTAG CAAAGTTCCT TTGCCAGATT ATCGAGCGGA TCTTGATGAA CGACATGGAT CCACTCAGAA AGAGATTAAA ATGTCCACAG AGACTGAGAG AAAACTTGGA AGTCTTCTGA AAACAACACA AGAATCAGGG TCTTCTAGTG CCTCTGCTTC ACCATTTAAT GGTCAACAGG ATCGTACAGC AACTCTTGGC TTGAAAAGAC CTGAATCTGC TTCCAACTTG CCGGATTCTC TTGAGAAAGA AAAATTCAGT GTTGCACTTA AGGAAAGGCA GGAAAAGCTA AAGGCAACTG AGAGTGTAAA AGCACTTCAT GCTTTCAGAG AAAAGCTACC TGCTTTTAAA ATGAAAGAGG GGTTTCTTAA CTCTGTTTCA GAAAATCAGG TATTGGTAGT TTCAGGAGAG ACCGGGTGTG GTAAAACAAC ACAACTTCCT CAATTTTTAT TGGAAGAAGA AATATCATCC CTAAGAGGTG CTGATTGCAA CATAATTTGC ACTCAACCTC GACGTATATC TGCCATATCT GTTGCTTCTC GTATATCTGC TGAAAGAGGT GAATCCATTG GTGAATCTGT GGGTTATCAG ATTCGTCTAG AATCAAAGCG TTCTGATCAA ACACGATTGC TATTTTGCAC TACTGGTGTT TTACTTCGGC GGCTGATTGA GGATCCCAAT TTAACTAACG TAAGCCATTT GCTCGTGGAT GAGATTCACG AGAGAGGCAT GAATGAAGAT TTTCTACTAA TCATACTACG TGATCTCCTT CCTCGACGCC CGGATTTGCG TCTTATTCTG ATGAGTGCTA CGATTAACGC TGACATGTTC TCAACATACT TTGGGAACTC TCCCACTATG CACATCCCGG GGTTCACATT CCCTGTGGCA GAGTTATTCC TAGAAGATGT ACTGGAGAAA AGTCGTTATA GTATTAAGTC GTCTGACTCA GGGAATTATC AAGGTAATTC GAGAGGTAAA AGAAGAGACT CAGAATCCAA GAAAGATGAC CTGACTACTC TTTTCGAGGA TATTGACATC AATTCTCACT ATAAAAGTTA TAGCTCGACC ACAAGGAATT CTCTCGAAGT ATGGTCTGGT GCACAGATTG ATGTGGATCT GGTGGAGGCA ACAATTGAAT ATATTTGTCG TCTTGAAGGT GGTGGGGCGA TTCTTGTCTT CCTTACTGGC TGGGATGAGA TTTCAAAACT GCTTGAGAAA ATTAATGGGA ACAACTTGCT TGGAGATTCT AGCAAGTTCT TAGTTCTTCC TCTACATGGT TCAATGCCGA CAGTTAATCA ACGTGAAATT TTTGACTGTC CACCTCCTAA CAAACGGAAA ATAGTTTTGG CTACAAACAT TGCCGAGAGT AGTATTACAA TTGATGATGT TATATATGTT GTGGATTGTG GTAAAGCAAA GGAAACTAGC TATGATGCTT TGAACAAGGT GGCATGTCTC TTGCCATCAT GGATTTCAAA GGCTTCAGCG CACCAGAGAC GAGGTCGTGC TGGACGTGTT CAAGCTGGAT TTTGTTATAG GTTGTATCCA AAAGTTATCT ATGATGCTTT TCCACAGTAT CAATTACCAG AAATCATACG GACTCCATTG CAAGAGCTAT GCCTGCATAT CAAAAGTTTG CAAGTTGGAT CCATAGGATC ATTCTTGGCA AAGGCACTGC AGCCACCAGA TGCACTTGCT GTTGAGAATG CTATTGAACT TCTCAAAACA ATTGGGGCTT TAAATGACAT GGAAGAGCTT ACACCCCTTG GTCGGCATCT TTGCACTCTA CCCGTGGACC CAAATATAGG AAAGATGCTT CTGATTGGAG CTATCTTCCA GTGCGTCAAT CCTGCTTTGA CAATCGCCGC TGCTCTGGCA TATCGTAGCC CATTTGTCTT ACCATTAAAT AGGAAAGAGG AAGCCGATGA AGCCAAAAGA TATTTTGCTG GTGATTCCTG CAGTGATCAC ATTGCTCTTC TTAAGGCATA TGAGGGATAT CGGGATGCAA AGCGTGGTGG AAACGAAAAA GATTTTTGTT GGCAAAACTT TCTTTCCCCT GTAACTCTAA GGATGATGGA AGATATGAGA AACCAGTTTC TTGATCTTCT ATCAGATATA GGGTTCGTAG ACAAATCAAA GCCAAATGCA TACAACCAAT ATAGCCACGA TATGGAGATG ATAAGCGCGG TTCTGTGTGC GGGGCTGTAC CCAAATGTTG TCCAATGCAA AAGAAGAGGG AAGCGCACTG TGTTCTACAC TAAAGAGTTG GGTAAAGTTG ATATTCACCC TGGATCTGTC AACGCAAGAG TGAATCTCTT CTCGTTGCCG TACTTGGTCT ACAGCGAAAA GGTGAAGACA ACAAGTGTTT ATATCCGAGA CTCGACAAAC ATATCAGATT ATGCACTTCT TATGTTTGGT GGCAATCTTA TGCCAAGCAA AACCGGGGAA GGTATAGAGA TGTTGGGAGG GTATCTCCAT TTCTCAGCCT CAAAGAACGT CTTGGAACTG ATACAGAGAT TGCGGGGAGA GGTGGACAAG CTGCTGAATA AGAAGATAGA GGATCCGAGT TTGGACATAA CGGTGGAGGG GAAAGGAGTG GTCTCAGCTG TGGTGGAGTT GTTACGTAGC CAAAACATTA GGTATTAAGC AAAATGCCAG TGAGTCTTAT CTTAGTGTAG AGGAATTAGG AAACCTTAGT TATTGGTAAA CGAGGTCAAT AGTTGGGACT CCAAACTCTG CTAAAATTTT AAAAGGTAAT ACAAGTTGTA GTTTTAGAGC TGTTCACATT TGTTTCGGTT AGGCCCGAGT TTTGTAGTAT CATCTCATTT CCCATTGCAG GCTTGCAGCT ACCTTTCTTT CTTTGTGGTT ATAATGTTTA AGTTGGAATG AAAACAAACA TTTGTTTATG CTTAGCAATT TCGTCTCGTC TTTCAATGCC AATTGCTTAC 
Length3370
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16132507.. 16138082
Download Sequence
A.thaliana
AGI-codeAT2G35920.1
DescriptionRNA helicase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg347147 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
11.4891 Ahg489362 Sas10/Utp3/C1D family
12.083 Ahg924045 calpain-type cysteine protease family
14.2127 Ahg475328 aminophospholipid ATPase 3
23.0651 Ahg491583 exocyst subunit exo70 family protein G1
23.2379 Ahg488375 RNA-binding KH domain-containing protein
27.55 Ahg352131 ubiquitin-specific protease 10
31.3688 Ahg486142 embryo sac development arrest 7
32.7109 Ahg490460 adenine nucleotide transporter 1
34.2929 Ahg471559 sec7 domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression