Detail



ID : Ahg940557

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940557|scaffold_601101.1
Sequence
TCTTCCTTGT GTGGAACAGC CAATGGCTAT GGAGTTTCGG AGGAGCAGTA GAAGTATATC GGAATCTTCT GGATCCGCGA TCGCCTTGAT TCTTCTGCTC TTCATCCATG GCGCTAACTC TTTCTATCTC CCAGGTGTTG CTCCTCAGGA TTTCGAAAAG GGTGATGAGC TGAAGGTGAA AGTGAATAAA TTAACTTCCA TAAAGACTCA GCTTCCATAC TCCTATTACT CCCTTCCTTT TTGTCGTCCT AGCAAGATTG TGGACAGTAC TGAGAATCTT GGAGAAGTGC TTCGGGGTGA CCGGATAGAG AATGCCCCAT ACTCGTTTAA AATGCGGGAG GCACAAATGT GCAATATTCT CTGCCGGGTC ACTCTTGATG CAAAGACAGC AAAAGCTTTT AAAGAAAAGA TCGATGATGA GTACCGGGTC AACATGATCC TCGACAACCT TCCTCTAGTT GTTCCAATCG AAAGAGTCGA CCAGGGTTCT CCCTCTGTTG TTTATCAGCT TGGTTATCAT GTTGGTCTTA AAGGCCAATA CGAGGGGAGC AAAGAGCAGA AGTTCTTTAT GCACAATCAC TTGGCATTTA CAGTCCGCTA TCACAGAGAT ATCCAAACTG ATGCTGCAAG AATCGTGGGA TTTGAGGTCA AACCTTACAG TGTGAAGCAT GAGTATGAGG GAGAGTGGAG TGAGAAGACC CGTCTGACAA CATGTGATCC TCATACGAAA CGCCTGGTCG TTAGCTCGGC TACCCCTCAA GAAGTTGAAC AAAAGAAGGA GATTATCTTC ACATATGATG TCGATTTCCA GGAAAGTGAA GTGAAGTGGG CATCTAGATG GGATACTTAT CTTCTTATGA GTGATAACCA AATTCACTGG TTCTCTATCG TCAATTCTCT GATGATCGTC CTATTCCTGT CTGGTATGGT GGCAATGATA ATGCTGAGGA CCCTTTACCG TGACATTTCA CGATACAACG AGCTCGAGAC TCAAGAAGAA GCTCAAGAAG AGACAGGATG GAAGCTTGTC CATGGTGATG TTTTCAGGCT TCCTACCAAT TCTGATCTGC TCTGCGTTTA CGTTGGAACA GGGGTCCAGT GTCTAGGCAT GGTATTTGTC ACAATGATCT TCGCCATGCT CGGATTTCTC TCCCCTTCCA ATCGGGGTGG TCTGATGACT GCAATGCTCT TGCTCTGGGT CTTCATGGGA CTCTTTGCTG GTTACGCCTC TTCACGTCTC TACAAAATGT TCAAAGGAAC AGAGTGGAAG AGAATCGCTT TCAGAACAGC CTTCTTGTTT CCTGCAGTTG TTTCAGCAAT CTTCTTTGTC CTAAACGCTC TCATCTGGGG ACAGAAGTCA TCCGGGGCTG TCCCCTTTGG GACAATGTTT GCCTTGATCT TCCTCTGGTT TGGCATCTCA GTTCCTCTCG TCTTTGTTGG GGGTTACATC GGGTTCAAGA AGCCAGCAGT TGATGACCCA GTGAAAACCA ACAAAATCCC GAGGCAAATT CCAGAGCAAG CTTGGTACAT GAACCCGGTT TTCTCAATCC TCATTGGAGG AATCTTACCG TTTGGTGCAG TCTTCATCGA GCTCTTCTTC ATCCTCACAT CCATCTGGCT CAATCAGTTC TACTACATCT TTGGGTTCCT CTTCCTCGTC TTTGTAATCC TCATCGTGAC TTGCGCCGAG ATAACCGTAG TACTCTGCTA CTTCCAGCTT TGCAGTGAGG ACTACCTTTG GTGGTGGAGA TCTTACCTCA CATCAGGCTC ATCAGCTCTC TACCTCTTCC TCTACGCCAC GTTCTACTTC TTCACAAAGC TTCAGATAAC CAAACTGGTC TCGGCGATGC TTTACTTTGG GTACATGCTC ATCGCGTCTT ACGCATTTTT TGTGCTCACA GGAACAATAG GGTTCTATGC TTGTCTCTGG TTCACAAGGC TCATCTATTC CTCTGTTAAG ATCGATTAGA GGATAATGAT GATCATCATG GCAAT 
Length1995
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4165291.. 4168216
Download Sequence
A.thaliana
AGI-codeAT5G10840.1
DescriptionEndomembrane protein 70 protein family
TAIR curator summary
Alias[EMP1][endomembrane protein 1]
Gene coexpression
MR
MR Locus Description
2 Ahg491608 myosin heavy chain-related
4.89898 Ahg928500 Clathrin, heavy chain
5.47723 Ahg939518 LMBR1-like membrane protein
7.48331 Ahg935945 indeterminate(ID)-domain 4
11.4018 Ahg486233 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
12.9615 Ahg491495 TPX2 (targeting protein for Xklp2) protein family
13.6748 Ahg484854 clone eighty-four
14.6969 Ahg472337
16.9706 Ahg473899 exocyst complex component sec3A
17.8885 Ahg494277 ATPase, F1 complex, delta/epsilon subunit
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression