Detail



ID : Ahg939518

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939518|scaffold_600062.1
Sequence
GACCTCGTAC ATTGCACGCG ATGGGGGATT TCAATCTCGC TCTCGTGATT GTTGCGATCG TAGTTTGCGT AATTGTTTTC ATCTCCAGTA TCTACCTCCT CGTCAACTAT CAGCATCCAG ATGATGCGAA CCAGGCTTAT TTCCCCAAAT TCGTTGTTGT TTTTGGTTTA TCGATTGCTA TGATCTCCAT TCTCATGTTA CCGGCGGATG TGGCAAACCG GCATGCTTGT CGACATTCGA TTTATAATGG CGCTTGTAAT CTCACCTTAC CTATGAAGGA GCTTTGGCTT GCCGTTTACA TTGTCGACGC TGTGCTTGTA TTCTTCATCA TCCCCTTCGC TATGTTTTTC TATGAAGGCG ACCAGGACAA GGCTCTTGGG AAGAGGATAA AAAGTGCTTT GATTTGGGTG GTTACTACAG CTGTTGTTTG TGCTCTGGTG CTTGGAATTT TATACGGAGT CATTGGAAAG GTGGACTTCT CTGTAAGGCA CTTATCTTCT GCCACGACGA CTTTCCCTAC TTCATGGCAG TTTTCAAATA ATCAACCTTG CATTGGTAAC ACTGCTCGTC AGTGCTCAGC ATATACAGCT AATGCTGCGT CTGAAAAGAC ATGGTCCATG CGTACTACGT TTCCAGAATA TGTTGTTGCT CTTGCTACAA TCGTTGGGTC AGTGCTCTTC ACGATATTTG GTGGTGTTGG TATTGCTTGC CTACCCTTGG GCCTTATCAC TGCATTCATC AGGCGACCAA AGGCTGTTAT CACTCGGTCA CAGTATATAA AGGAAGCAAC TGAACTAGGT AAAAAGGCAA GAGATCTAAA GAAAGCAGCT GATGCACTTC ACCAGGAAGA ACGAAGTGGT GCTAAGGGAA GGAAGTGGAG GAAAAATGTG AAAGCAGTTG AAAAGGAGTT GCTCCAATTG GAAGAAGATG TGAACCTCTT AGAAGAGATG TATCCGCAAG GAGAGCAGGC AGAGACTGCT TGGGCCTTCA CTGTCCTGGG ATACTTGGCC AAGTTTATTC TTGGAATCTT AGGATTAATT GTTTCTGTGG CTTGGATTGC TCACATCATC ATATATCTAC TTGTTGACCC TCCCCTCTCT CCTTTTCTTA ATGAAGTTTT CATCAAACTG GATGACGTCT GGGGTCTTCT GGGCACAGCT GCCTTTGCTT TCTTCTGTTT CTATCTCCTA CTTGCTGTTA TTGCTGGGGC AATGATGCTT GGTTTGAAGC TGGTCTTCAT TACCATTCAT CCTATGAAAT GGGGAGCCAC TCTTATGAAC TCTTTTCTCT TCAATGTCGG TCTCATTCTC CTCTGTTCTA TCAGTGTGAT TCAATTCTGC GCCACTGCAT TTGGATATTA TGCTCAAGCC ACCGCCGCTC AGGAGATATT TGGCCACACT TTGCAGTCCC TTCGCGGTAT TAAGTACCTC TACAAGTACA ATGTGTTCCA GATCGGGTTT GTTGTCCTCG CTGGACTGAC CTTTTTATAT TACATAGCCT TTGGATGGAG AAGAAAAAAG CCGAGCGGTA GATTCCAGCT CTCTACCTAA TGTAAATCTC TTCTTTTGAT TTTATCCTTT TTGTTTCCTC GTCTTTGGGA TCGATCGCGT GCCACTGAGG ATTGCTGTGT CCACAATTAT ACCGAGATTG GTCTCATGAT CTGTGCAAGT GGTC 
Length1674
Protein Sequence
Protein Residue
Map Locationscaffold_6: 226455.. 229811
Download Sequence
A.thaliana
AGI-codeAT5G01460.1
DescriptionLMBR1-like membrane protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg326991 ARM repeat superfamily protein
5.47723 Ahg940557 Endomembrane protein 70 protein family
5.91608 Ahg919553 DNA ligase 1
11.8322 Ahg333928 global transcription factor group E4
12.49 Ahg476156 equilibrative nucleotide transporter 1
14.0712 Ahg479648 dentin sialophosphoprotein-related
14.6969 Ahg922237 Adaptin family protein
17.6635 Ahg488087 DNA binding;zinc ion binding;DNA binding
18 Ahg471140 dynamin-like protein 6
19.5959 Ahg488102 CCCH-type zinc finger protein with ARM repeat domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression