Detail



ID : Ahg940877

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940877|scaffold_601421.1
Sequence
GGACCTCAAT TAACCGGACA ATGAGACCTG CGGCGGAGCT TGCGGTGAGG ATTGGCTGTG AGCTTCTAAA AGTTTCCGGA AGCTCTCGAT CAGCTCGGAT ATGGAGTCCA TCGGTTGAAC AGAGCCTTCA CGGTCTCGGT TTTCGTCACT CAATAAGCCC TTCGCTTGTG GCTCGAGTCA TAGACCCGTT TCTCCTGAAC CACCACTCCC CCGCTCTCGG TTTCTTCAAT TGGGCTGCTC AACAACCTGG TTACTCTCAC GACTCCGTCT CTTACCATTC TATCTTCAAG TCTCTTTCGC TTTCTCGTCA GTTCTCCGCC ATGGACGCTC TCTTCAAACA GGTCAAATCG AACAAAATCC TTCTCGATTC TTCCGTGTAT CGCTCCCTCA TTGATGCGCT AGTGTTGGGT AGGAAATCTC AGAGTGCGTT TTGGGTTTTA GAAGAAGCTC TTTCGACGGG TAGGGAGATT CATCCCGATG TTTGCAATCG TCTTTTGGCT GCTTTAACTT CTGATGGGTG TTTTGATTAT GCACAGAAAC TGTTTGTTAA AATGCGCCAA AGAGGTGTTT CTTTGAATAC TCTTGGCTTC GGCGTTTATA TAGGAAGTTT TTGTACAAGT TCTGAAACGG ATCAGCTCTT GAGATTGGTG GATGAGGTTA AAAAGGCTAA CTCGAACATC AATGGCTCCA TTATTGCACT GTTGATTCTC CATGGTCTTT GTAAGTCTTC TCGACAAATG GATGCTTTTT ATATTTTGGA AGAGCTGAGA AACATAGATT GCAAACCGGA TTTTATGGCT TATAGAATCA TAGCTGAAGC ATTTGTAGTT ACTGGGAATT TGTATGAGAG ACAAGTCGTT CTAAAGAAGA AGAGAAAGCT CGGAGTAGCA CCCAGGAGCA GCGATTACCG AGCTTTCATA CTGGATTTGA TTTCCGCTAA AAGATTAATG GAGGCTAAGG AAGTAGCTGA GGTGATTGTG AGTGGAAATT TCCCCATGGA TAATGATATC TTAGACGCGT TAATTGGATC AGTCTCTGCA GTTGATCCAG ATTCTGCTGT TGAATTCTTA GTTTACATGG TCAGCACAGG GAAATTGCCT GCTATTCGGA CTCTGAGCAA ATTGAGTAAG AATCTCTGCA GGCACGACAA GAGCGACCAT CTGATAAAGG CTTATGAGCT TTTGTCAAGC AAAGGTTATT TCTCAGATCT TGAGAGTTAC AGTCTGATGA TATCGTTCTT GTGCAAGGCC GGGAGAGTCA GAGAAGGTTA CACTGCTCTG CACGAAATGA AGAAGAAAGG GCTTGATCCA GATGTGTCAC TCTATAACGC TCTCATTGAT GCTTGCTGCA GAGCGGAAAT GATCCGTCCA GCAAAGAAAC TGTGGGATGA GATGTTTGTG GAGGGCTGCA AAATGAATCT GACGACATAT AATGTACTTA TTAGGAAATT ATCAGAAGAA GGCGAGGCAG AGGAGTCTTT GAGGCTGTTT CAGAAGATGC TTGAGAAAGG GATAGACCCA GATGAAACAA TCTATATGTC ACTCATTGAA GGCCTATGCA AGGAGACAAA ACTTGAAGCT GCTTTGGAAG TCTTCAGAAA GTGCATGGAG AGGGATAATA AAACAGCTGC AAGAAGAGTA TTAAGCGCGT TTGTATTAAA TCTATGCAGC AACGGCCATT TTAGTGAGGC ATCGCAGCTG CTGCGCGAGA AAGAACACTT AAAACACACA AGTGCACATG TTGTGTTGCT GAAATGTGTG GCGGATGCGA AAGAGGTTGA GATTGGAATC AGACATATGA AATGGATCAA AGAGGTATCG CCGTCTCTTG TTCACACAAT ATCTTCTGAC CTGTTGGCGT CTTTCTGTTC ATCATCTGAT CCTGATTCCA TTCTTCCATT TATTCGAGCA ATTGAGCACA CATAATTACA CCAATAGGCT ATTAG 
Length1945
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5479769.. 5481773
Download Sequence
A.thaliana
AGI-codeAT5G14080.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.48331 Ahg471347 Transcription factor jumonji (jmjC) domain-containing protein
9.59166 Ahg917192
19.9499 Ahg336756
23.3238 Ahg910878
24.7386 Ahg478089 Transcription factor jumonji (jmjC) domain-containing protein
34.8138 Ahg329122 zinc finger WD40 repeat protein 1
38.4187 Ahg354611 Protein of unknown function (DUF2921)
40.9878 Ahg935024 Tetratricopeptide repeat (TPR)-like superfamily protein
42 Ahg470500 dentin sialophosphoprotein-related
44.1248 Ahg949163 Ubiquitin carboxyl-terminal hydrolase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression