| Annotation |
|---|
| Description | jgi|Araly1|941415|scaffold_601959.1 |
| Sequence |
TTTCTCTGAA TTGAAAGACT CAGATGTCTT CTCTGTCGCA ATCGCCAACC CCGCCGGAGA TGGATATCCA ACCGCCGGCA TTGGTTAACG ATGATCCTTC CACTTATTCC TCCGCTTTGT GGGATTGGGG AGATCTCCTT GACTTCGCCG CAGACGAACG CCTTCTCTCT TTAGACTCCG ATCAAACTCC TTTCCCTCCC GTTCCTTCTC CTCCTCTTCC GCCGCTGATT CCGACGCAAA CTCCGGCGGA ATCTGAATTG TATCCTTCTC CGGAAGAATC GGGTTCTGGT TCGGATCGGG TTAGGAAGCG GGACCCGAGA TTGATTTGTT CCAATTTCAT TGAAGGTATG CTTCCGTGTT CTTGTCCTGA GCTTGATCAG AAATTGGAGG ACGCTGAGCT TCCGAAGAAG AAACGGGTTC GCGGCGGGTC GGGGGTGGCT CGATGTCAGG TTCCGGATTG TGAAGCGGAT ATTAGCGAGC TCAAAGGGTA CCATAAGAGG CATAGGGTTT GTCTCCGGTG TGCTAACGCC AGCTCCGTTG TCCTTGATGG AGAGAATAAG AGATACTGTC AACAGTGTGG AAAGTTTCAT GTTCTCCCGG ACTTTGATGA GGGAAAACGC AGCTGTCGGA GAAAGCTAGA GCGTCACAAC AACAGACGGA AAAGGAAACC TGTAGATAAA GGAGGCGTTG CTGCAAAACA ACAGCAAGTG CTATCTCAGA ATGATAACAG CGTCATTGAT GTTGAGGATG GAAAAGATAA TACATGCTCT AGTGACCAGA GAGCAGAACA AGAGCCTTCA CTGATTTTTG AAGATCGGCA TATTCCCACT CAGGGTTCTG TACCTTTTAC CCAAAGCATC AACGCAGACA ACTTTGTCTC TGTTACAGGT TCAGGTGAAG CTCAACCAGA TGAAGGAATG AATGACACAA AATTTGAACG TTCACCTTCC AATGGCGACA ACAAAAGTGC TTACTCAACT GTTTGCCCAA CTGGTCGGAT CTCTTTCAAG CTCTACGATT GGAATCCAGC GGAGTTCCCA CGGAGACTAC GTCATCAAAT ATTCCAATGG TTGGCCAACA TGCCTGTTGA GCTGGAGGGC TATATCCGTC CTGGATGTAC AATTTTGACA GTCTTTATAG CAATGCCAGA GATTATGTGG GCGAAGTTGT CTAAAGATCC TGTGGCATAT CTGGATGAAT TTATTCTTAA ACCTGGAAAG ATGCTATTTG GAAGAGGCTC GATGACAGTC TATTTGAACA ACATGATTTT CCGTCTTATT AAAGGTGGAA CAACTTTAAA GAGAGTCGAT GTAAAATTAG AGTCGCCAAA ACTTCAGTTT GTGTATCCTA CATGTTTTGA AGCTGGAAAA CCAATTGAAC TCGTTGTTTG TGGACAAAAC CTTCTGCAAC CCAAATGCCG GTTTCTCGTG TCTTTTTCTG GGAAGTACTT ACCACATAAC TATTCTGTTG TTCCTGCACC GGACCAGGAT GGGAAGCGTT CTTGTATTAA CAAGTTCTAT AAGATCAATA TTGTGAATTC TGACCCAAAT CTCTTTGGCC CTGCCTTTGT CGAGGTTGAA AATGAATCTG GTCTATCAAA TTTCATACCT CTAATTATTG GAGATGAAGC TATATGTTCA GAAATGAAAC TAATAGAGCA GAAGTTCAAT GCTACACTCT TTCCAGAAGA ACAAGGAGTT ACCGCTTGCT CTTCTTTGAC TTGCTGTTGC AGGGATTTTG GGGAGAGACA GAGCACCTTT AGTGGCCTCT TGTTAGATAT CGCATGGTCA GTGAAGGTGC CCTCTGCAGA ACGCACTGAG CAACCTGTGA ACCGATGTCA GATAAAAAGA TACAACAGAG TGTTGAATTA TCTGATACAG AATAACTCAG CGTCAATCTT AGGAAGCGTA CTGCACAATC TGGAAACTTT GGTGAAAAAA ATGGAGCCAG ACAGCCTAAT TCATTGTACC TGTGACTGCG ATGTGAGGCT TCTACATGAA AATATGGATT TGGCTAGTGA CCTTCACATA AGGCATCAAA GCCATAAAGA GTCAAAGGTG AATCCAGGGA ATGTTCTTCC TTCTTCAGGT TGCTGTTGTG TGAGTAGTTT CCAAAAGGAC ATACCATCAA GAATATTAAA CTTCAATCAG GATCCTGAAG CAGGATTAGA TTGTAAAGAG AGAATACAGG CGGACTGTTC ACCAGATAGT GGCGGAAAAG AGACTGATCC TCTTATAAAC AAAGAGGTTG TCATGAACGT AAATGACATA GGAGACTGGC CAAGGAAGAA GTCCTGTATA ACAACACACT CAGCTCTAAC ATTCAGGTCC CGTCAAACCG TGTTCTTAAT CGCTACGTTT GCTGTCTGTT TTGCGGTCTG TGCGGTTCTC TACCATCCAA ACAAGGTCAC ACAGCTTGCA GTGGCAATCC GAATGAGATT GGTACACAAA ATTTGAATAA AAGTTCAATA GCAGAG |
| Length | 2476 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 7503632.. 7507889 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G18830.3 |
| Description | squamosa promoter binding protein-like 7 |
| TAIR curator summary | Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c. |
| Alias | [ATSPL7][SPL7][SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7][squamosa promoter binding protein-like 7] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.48683 |
Ahg488386 | U-box domain-containing protein |
| 14.3875 |
Ahg495654 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 15.2971 |
Ahg912447 | Family of unknown function (DUF572) |
| 19.4936 |
Ahg475503 | GPCR-type G protein 1 |
| 20.0998 |
Ahg483031 | RNI-like superfamily protein |
| 20.8567 |
Ahg470981 | homolog of yeast sucrose nonfermenting 4 |
| 24.7386 |
Ahg478716 | proteasome activating protein 200 |
| 26.7021 |
Ahg938852 | DNAse I-like superfamily protein |
| 32.311 |
Ahg927133 | transcription coactivators |
| 36.3731 |
Ahg477754 | Protein prenylyltransferase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|