| Annotation |
|---|
| Description | jgi|Araly1|483031|fgenesh2_kg.4__2091__AT2G39940.1 |
| Sequence |
TCCCACTTTC TTCTTCTTCC TCCCAATCCG CCTCTTCTTC CTACGCGTGT CTCCTTCTCC CTCACTCTCG TGTTTATGTG TGGATCTGCG ACCTCGATTT CAATTCGAAG TCGTCGGTTT CTTCACTAAA TCGAATCTCT TTTTTTTTCT TCTTCGATCC GATGGAGGAT CCTGATATCA AGAGGTGTAG ATTGAGCTGC GTCGCGACGG TTGATGACGT CATCGAGCAA GTCATGACGT ATATAACCGA CCCCAAAGAT CGCGATTCGG CGTCTTTGGT GTGTCGGAGA TGGTTCAAGA TTGATTCCGA GACGAGAGAG CATGTGACTA TGGCGCTTTG CTACACTGCG ACGCCTGATC GTCTTAGCCG TCGATTTCCG AACTTGAGGT CGCTCAAGCT TAAAGGCAAG CCTAGAGCAG CTATGTTTAA TCTCATCCCG GAGAACTGGG GAGGATATGT TACTCCTTGG GTTACTGAGA TTTCTAAATC GCTTAAGCAG CTCAAATCGG TTCACTTCCG ACGGATGATT GTCAGTGACT TAGATCTGGA TCGTTTAGCT AAAGCCAGAG CAGATGATCT TGAAGCTTTG AAGCTCGATA AGTGCTCTGG TTTCACTACT GATGGACTTT TGAGCATCGT TACACACTGC AGGAAAATAA AAACGTTGTT AATGGAAGAG AGTTCTTTTA TTGAAAAGGA TGGTAAGTGG CTTCATGAGC TTGCTCAGCA CAACACATCT CTTGAGGTTT TAAACTTCTA CATGACGGAG TTTGCCAAAA TCAGCGCCAA AGACTTGGAA ACCATAGCTA GAAATTGCCG CTCTCTGGTT TCTGTGAAGG TCGGTGACTT TGAGATTTTG GAACTAGTTG GGTTCTTTAA GGCCGCAGCT AATCTTGAAG AATTTTGTGG TGGCTCCCTG AATGAGGATA TTGGAATGCC TGAGAAGTAC ATGAATCTGG TTTTCCCCCG AAAGCTATGC CGTCTAGGCC TCTCTTATAT GGGACCTAAT GAAATGCCAA TACTATTTCC ATTCGCGGCC CAGATCCGAA AGCTGGATTT GCTTTATGCA TTGCTAGAAA CTGAAGACCA TTGTACGCTA ATCCAAAAGT GTCCTAATTT GGAAGTTCTC GAGACAAGGA ATGTAATTGG AGATAGGGGT CTAGAGGTTC TTGCACAGTA CTGTAAGCAG TTGAAGCGGC TGAGGATTGA ACGGGGTGCA GATGAACAAG GAATGGAGGA CGAAGAAGGC TTAGTCTCAC AAAGAGGATT AATCGCTTTG GCTCAGGGCT GCCAGCAGCT AGAATACATG GCGGTGTATG TCTCAGACAT TACGAACGAA TCTCTTGAAA GCATAGGCAT ATATCTGAAA AACCTCTGTG ACTTCCGCCT TGTCTTACTC GACCGGGAAG AAAGGATTAC AGATTTACCA TTGGACAACG GAGTGCGATC CCTCTTGATT GGATGCAAGA AACTCAGACG GTTTGCTTTC TATCTCAGAC AAGGCGGCTT AACCGACTTG GGCTTAAGCT ACATCGGACA ATACAGTCCA AATGTGAGAT GGATGCTGCT GGGTTACGTA GGTGAATCGG ATGAAGGTTT AATGGAATTC TCGAGAGGTT GTCCGAATCT ACAGAAGCTA GAGATGAGAG GCTGTTGCTT CAGCGAGCGA GCAATCGCTG CAGCAGTTAC AAAATTGCCT TCACTGAGAT ATTTGTGGGT ACAAGGTTAC AGAGCATCAA TGACGGGACA AGATCTAATG CAGATGGCTA GACCGTACTG GAACATCGAG CTGATACCAT CGAGAAAAGT ACCGGAAGTG AATCAGCTAG GAGAGATAAG AGAGATGGAG CATCCGGCTC ATATATTGGC TTACTACTCT CTGGCTGGTC AGAGAACAGA TTGTCCAACA ACTGTTAGAG TCCTGAGGGA GCCAATATGA TTGGACCAAA AAACAGGTTT GTATATAAAG ATTTGTAGTG TCGAGTTTTG GGGTTTCTTT GGTTCTTTAT TTTTGATTCA TGTTGTATCG TCAGATGTTT TTGGGAGATT ACATAGAGTC TTGTTTGTAT GGTCATCACT TCTTTATTTT TCCACAGGGG TCTGTCTACT CTTCTTTCTT TAATAAAACC CCAAAGATTT TGATTTGTGG TTGTGATTGT TTTGATAACA TTAGTAAAAT AGCAAATAAT A |
| Length | 2191 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 18416780.. 18420042 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G39940.1 |
| Description | RNI-like superfamily protein |
| TAIR curator summary | Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation. |
| Alias | [COI1][CORONATINE INSENSITIVE 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg927706 | Flavodoxin family protein |
| 2.23607 |
Ahg491240 | TIP41-like family protein |
| 2.44949 |
Ahg488471 | HEAT repeat-containing protein |
| 4.47214 |
Ahg489669 | Calcium-binding EF-hand family protein |
| 4.69042 |
Ahg943759 | Nucleotidyltransferase family protein |
| 4.89898 |
Ahg495910 | homolog of yeast FIP1 [V] |
| 5.09902 |
Ahg938953 | farnesyltransferase A |
| 5.2915 |
Ahg477260 | CASC3/Barentsz eIF4AIII binding |
| 5.47723 |
Ahg321506 | vacuoleless1 (VCL1) |
| 5.74456 |
Ahg912012 | proteasome beta subunit C1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|