Detail



ID : Ahg470981

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470981|fgenesh2_kg.1__935__AT1G09020.1
Sequence
ATTCTTCACC TTGAAAGACC ATTAACATCA TTCCTTCCCC AGATCCAAAC AATGCCATCT CCACTCTCTC TATTTAGGGT TCTCTCCATC TTTTCAAATC CCTAATTCTT GCTCCTTCCT CATCATCCAC GTCTCTCTAC TCCCCCAATT TAAAGATCAG AAGCCGCGAA TTCCTCTGGC AACTTTTCCT CGGAATAGGG TTTCAGGTGT TGTGTATTGT CATCAGTTGA CCTTTGCTTT TATAGCCAGA TCGTTCGTGC TTTGAGTTTT TAGGGCTCTT TTACAAGGTT TCGTGTTGGT GAAATTTCTT CTACCTAGGT TGGGGGAAGA GTTGAGTAAT TTCGTTGTAG ATCGTGATTT GGGCTTTTAG GGTTTCGGTT ACTGGTGGCT GGAATTTATG GTAGCGTTAT TGAATTCGGA CTCTCTGCAT GTGTAAGCGT TGAAGTTGCA AGTTTCACCG GGTTTTGTTT CTTCTGCTCA AGAGTCTGAG ACATTTGTAC GCATTTAGAA TCGATTGAGA GGATTTTTAG GAATTAGTTT CTGTGGATTG TAACTATATA AACACTGGGA GGGGATGTTT GGTTCTACAT TGGATAGCAG CCGTGGAAAC AGCGCTGCCT CAGGGCAGCT TCTTACTCCG ACCCGCTTCG TGTGGCCTTA TGGAGGTCGA AGGGTCTTCC TAAGCGGATC TTTCACCAGG TGGACTGAAC ATGTGCCAAT GTCACCGCTT GAGGGCTGCC CGACTGTTTT TCAAGTCATT TGCAACTTGA CGCCAGGATA TCATCAGTAT AAGTTTTTTG TTGATGGGGA ATGGCGGCAC GATGAGCACC AACCATTTGT AAGCGGAAAT GGTGGAGTAG TGAATACAAT ATTTATAACT GGACCCGATA TGGTTCCTGC TGGTTTTAGC CCAGAGACAC TCGGCCGGTC GAATATGGAT GTGGATGATG TCTTCCTGCG AACGGCTGAC CCGTCAGGGG TTGATTTGGA GGTTTCTCGT CACCGTATAT CTGTTTTATT GTCAACCCGT ACTGCATATG AGCTGCTCCC AGAATCGGGC AAGGTTATTG CATTGGATGT TAATTTGCCA GTGAAGCAAG CATTCCATAT ACTCTATGAG CAGGGAATCC CTTTGGCTCC TCTTTGGGAC TTTGGTAAAG GTCAATTTGT TGGAGTTCTT GGTCCACTAG ACTTCATTCT AATACTGAGA GAGCTTGGAA CTCATGGATC AAACTTGACA GAGGAAGAGC TTGAGACGCA CACAATAGCA GCCTGGAAAG AGGGGAAGGC TCATATTAGC CGACAATATG ATGGAAGTGG GAGACCATAT CCTAGGCCAC TTGTTCAGGT TGGACCCTAT GATAATCTGA AAGACGTTGC CCTGAAAATT TTGCAAAACA AGGTGGCAGC TGTTCCGGTT ATATATTCTT CTTTGCAGGA TGGTTCATAT CCGCAGTTAC TGCATCTTGC TTCGCTATCA GGCATCTTAA AATGTATATG CAGATACTTT AGACATTCGT CTAGCTCTTT ACCAATCCTT CAGCAACCCA TTTGTTCAAT TCCCTTGGGT ACTTGGGTCC CTAGAATCGG AGAATCAAGT AGCAAACCTC TCGCTACATT GAGACCTCAT GCCTCTTTGG GTTCTGCGCT CGCATTATTA GTTCAAGCTG AAGTCAGTTC AATTCCCGTA GTGGATGATA ATGACTCGCT TATTGACATA TACTCTCGAA GTGATATAAC TGCTCTGGCT AAAGATAAAG CATACGCACA GATTCATCTT GATGACATGA CGGTTCACCA GGCGCTGCAG TTGGGGCAAG ATGCAAGTCC ACCTTATGGA ATCTTCAACG GGCAGAGATG TCACATGTGC TTGCGCTCGG ACTCTCTTGT GAAAGTGATG GAGCGGTTGG CGAATCCAGG TGTAAGGAGG CTGGTGATAG TGGAAGCAGG TAGCAAACGT GTGGAAGGTA TCATTTCATT GAGCGATGTT TTCCAATTCC TGCTCGGTCT TTGACTCCCA CAGCAAAACA ACCTCCTCAT CAAACTCTTT TTCTCAATTC CTCAATCAAA ACTACCCAAC AATTTGCTTC TTCTTCTTTT TATCTTCTTG CAAGGAATTT GTAAATTTGC TACGAACCTC TTCTTCTTCA TTGTTTTCTT ATTATTTTTG TTGTTTTAGT TGAACAAGTT TCCATTCTTG TGAAGATATT GGCTACCGGA ATCTTTTACT AGTAGCTTCC 
Length2240
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3259147.. 3264084
Download Sequence
A.thaliana
AGI-codeAT1G09020.1
Descriptionhomolog of yeast sucrose nonfermenting 4
TAIR curator summaryputative activator subunit of SNF1-related protein kinase
Alias[ATSNF4][SNF4][homolog of yeast sucrose nonfermenting 4]
Gene coexpression
MR
MR Locus Description
7.28011 Ahg488386 U-box domain-containing protein
7.34847 Ahg477999 acyl-CoA dehydrogenase-related
9 Ahg920022 Predicted pyridoxal phosphate-dependent enzyme, YBL036C type
11.4891 Ahg946262 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
16.2481 Ahg474398 Transducin/WD40 repeat-like superfamily protein
17.7764 Ahg942040 ABC1 family protein
18.0278 Ahg930429
18.4391 Ahg474651 ubiquitin-protein ligase 1
19.8746 Ahg897087 HOPM interactor 7
20.8567 Ahg941415 squamosa promoter binding protein-like 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression