Detail



ID : Ahg941585

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941585|scaffold_602129.1
Sequence
GTAAATCTTC ATCTTCAACA ATGAAAAGGA GGAATAAGTC ATCTCAACTC TTTTCTTTGC TCTGTATCTT GCTGCAACAC ATTTCTAATC TTGCTGGTAA CCCAAAGATT GTGCTCCCAG TTCCTGCCTT CAATGTAATC AACGGTGGAT CTCATGCAGG AAACAAGCTT GCAATGCAGG AGTTCATGAT TCTCCCTGTT GGAGCTTCAT CTTTCAAGGA AGCCATGAAA ATGGGTGTAA ATCAAGAACA TTGCTTTCAA TATCTATCCG CTGCTCTATT TGTGAATTTG CAGAACAACG ATGGTTCTCA AAAGATCTCT GGAGATGCTC TCAAGGACTT GTACAAGTCA TTCGTTTCAG AGTACCCTAA TGTATCCATT GAAGACCCAT TTGACCAAGA TGACTGGGAG AACTATGTTG AAATGACCGT TGAATGTGGC GAGAAAGTTC AAATCGTCGG TGATGATTTG CTGGTCACCA ACCCCAAGAG AGTTGAGAAG GCAATCAATG AAAGGTCTTG CAATGCTGTT CTATTGAAGA GTCTCGAGGC AGTTAAGATG TCAAAGAGAG CTGGTTGGGG AGTGATGGCT AGCCACCATA GTGGAGACAC TGAGGACACA TTCATTGCTG ACTTATCTGT CGGTTTGTCA ACCACCGGAG CTCCTTGCAG ATCAGAGCGT CTTGCCAAAT ACAACCAGAG TGCATGGTCA GAGCTGCAGT CTCTGTGTAC TTCGATTGAA ATCTTGAATA GCCTTAATTT AAACAATCAC TGGATGAAAG AGTGTTTTTC TTGGCAATGC GGATCAAGAA CTCAGAATGC ACATTGGGTC TTTGGCGAAG TACGAGTATT TGCAAGGGAA TTTGACCACG TTGAAATCAT GGTTAGAGAA CATCTGAGAA ACGATCCCTA TCGGATGGAA GATATGGATT TGTATTCTTA TGTTCTGTAT GCAAAAGAAG CATGTGCTGC GCTGAGTTAC CTTGCACATA AGGTGGTTTT GACTGATAAG TACAGACCTG AGTCTTGCTG CATCATTGGC AACTACTACA ATTTAAAAGG CCAGCATGAG AAAACAGTTA TGTACTTCCG GAGAGCTTTA AAACTGAACA AGTATTTATC GGCGTGGACT CTTATGGGCC ATGAATATGT TGAGATGAAG AACACGCATG CTGCCATTGA TGCATATCGA CGAGCTGTTG ATATAAACCC TTGTGATTAT CGAGCTTGGT ATGGGTTAGG ACAAGCATGT GAGATGATGG GGATGCCTTT CTATGCACTT TACTATTTTC GCAAATCCAT ATTCTTTCTT CCAAACGATT CTCGGTTGTG GATAGCCATG GCTAAATGTT ATCAAACCGA ACAGCTTTAC ATGCTTGAAG AGGAATATCA CTTAATCAAG CTTCACCAGA AGCTTGGACG TAATGAAGAA GCTGCATTTT ATTTCGAGAA GGATTTAGAG AGAATGGATG CTGAAGGATT AGAAGGACCA AACAAGTTTG AGGCTTTAAT TTTTCTTGCC ACACATTTTA AAACTCACAA GAAATTCGCA GAAGCAGAAG TGTATTGCAC CCGTCTTCTC GATTATAGTG GACATTGTTC TTTTGCTTTT GCTTATCTCT CTCTTGATTT TTTCTTTGTA TTTCTCCTGA ATATATATAT AGATAAGCGC ACAAAAACAT GGAAAAAAGG CCAGAAAGAC CGAGAGGTAT AAAGATGAGA TGACCACTAC AAT 
Length1733
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8196583.. 8200167
Download Sequence
A.thaliana
AGI-codeAT3G48150.1
Descriptionanaphase-promoting complex subunit 8
TAIR curator summaryanaphase-promoting complex or cyclosome subunit
Alias[APC8][CDC23][anaphase-promoting complex subunit 8]
Gene coexpression
MR
MR Locus Description
5.19615 Ahg936168
6.7082 Ahg934323
8.18535 Ahg497304 phosphate transporter 1;1
8.7178 Ahg919569 arogenate dehydratase 6
9.38083 Ahg482364 Transcription elongation factor Spt5
12.1655 Ahg316069 Calcium-dependent lipid-binding (CaLB domain) family protein
12.7279 Ahg938189 Enolase
14.5602 Ahg913518 acetyl-CoA carboxylase 1
19 Ahg948085 alpha/beta-Hydrolases superfamily protein
19.8746 Ahg490949 PQ-loop repeat family protein / transmembrane family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression