Detail



ID : Ahg941621

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941621|scaffold_602165.1
Sequence
CCGATCCAAA TTTTGAGACG ATGAGGAAGC GTCATCCCAA GGGATCAGAT TTGTCAGAGC CATCTTCTTC CAGTCAAGAA ACTGATGCTT CTTCTGATAA AGAAGCTCTC GATAAGGAAG TGCAGGCTGA TGTTAAAAGA TCAGGAAAAG TATGGTTTTC AGTGTTGATT TTGATCACTT ACTCTTCTTG GGTTGTTTAC AATTATCAGC TTGGGAATTT ACCTAAACCC TTAACCGCTA AACAAGCTGG TAAAAGGGGT TTCTCTGAAT TTGAAGCTAT CAATCATGTT AAGGCTTTGA CTCAGTTTGG TCCTCATCCT GTTTCTTCTG ATGCTCTTGT CCATGCCCTT GAGTATGTAT TGGCAGAAGT TGAGAAAGTT AAAGAAACTG CTCATTGGGA AGTTGATGTG AATGTTGACT TCTTTGAATC CAAATTTGGT GTAAATCGTT TGGTCGGTGG TCTGTTTAAG GGGAAGTCAC TTGTGTATTC AGATATAAGT CACATTGTAC TAAGAATCTT GCCGAAATAT GAATCAGACG CTGGAGACAA TGCTATTCTG GTCTCTTCTC ACATTGATAC TGTCTTCACA ACAGGTGGGG CTGGAGATTG TAGTTCCTGT GTAGCTGTAA TGCTGGAGTT AGCTCGATCT GTTTCCCAAT CGGCTCATGG ATTCAAGAAT TCGATTATCT TCTTGTTCAA TACTGGAGAG GAAGAAGGTC TTAATGGCGC TCATAGCTTT GTAACTCAGC ATCCATGGAG TTCCACAGTA CGTTTAGCTA TTGATTTAGA GGCCATGGGT ACGGGTGGAA AGTCCAGTAT TTTTCAGGCT GGCCCGAGTC CATGGGCTAT TGAAAATTTT GCTTTGGCCG CGAAATATCC ATCTGGTCAG ATCATTGGGC AGGATCTGTT CACTTCTGGA GTCATAAAAT CTGCGACCGA TTTCCAAGTA TACAAGGAGG TTGCTGGTCT CTCAGGGTTG GACTTTGCTT TTGCAGATAA TACGGCTGTC TATCACACTA AAAATGATAA AATAGAACTA ATAAAACCAG GATCGCTCCA GCATCTTGGG GAAAATATGC TTGCTTTCCT TCTTCGGGTT GCTTCATCGT CTGATCTGCC AAAGGATGAT ACTCTCCAGG GAGAGGAGAA ATCGACCCCG GACTCAGCTG TCTATTTTGA CATTTTGGGG AAGTATATGA TTGTATACCG GCAAAGTTTG GCGACAATGC TATATGTTTC GGTGATCATG CAATCGATTC TTATATGGGT TTTGTCTGTG TTCATGGGTG GTTATCCGGC TGTTGTGTCG CTGATTTTGT CGTGTTTGAG TATTATCCTC TCATGGATAT TCTCAGTAGC TTTCTCGGTA GCTGTTGCAT TCATATTGCC CTGGATTTCC TCGTCACCTG TGCCGTATGC TTCAAACCCA TGGATGGTAG TTGGATTGTT TGTGTCGCCT GCGATTTTGG GGTCAATTAG TGGTCAGCAT GTGGCCTTTA TTTTCCTTCG GAAGAAATCT TCGAATAGGA ATTCGAACAA AATGCAAGTC TCACCAAGAC TACGAGATAA CTTGGCCAGG CTGGAGGCTG AAAGATGGCT GTTTAAAGCT GGTTTTATAC AGTGGCTTGT TCTTCTGGCC TTGGGAACCT ATTATAAACT TGGATCGACT TACCTCGCTC TGGTTTGGCT AGTTCCTCCT GCATTTGCAT ATGGATTGCT CGAGGCAACT TTATCTCCAA TCCGACTGCC AAAGCCCCTC AAACTTGCAA CTCTGCTTAT CAGCCTGGCT GTACCAATTT TGGTTTCATC TGGCAGTTTT ATCCAGTTGA CGGGCACAAT GATCGGCATG CTCATTCGAT TTGACAGTAA CCCAGGCGGG ACTCCAGAAT GGCTAGGCAA TGCATTGATC GCTGTTGTTA TTGCTACTTT CATAAGTCTG ACCACGGTAT ACCTGCTGGC CTATATTCAT CTCTCCGGTG CAAAAAAGTC GATTGTCACT GCATTATGCA TTATCACTGC CCTCTCTCTT GCTCTTGTAT CTTCTGGTGT TCTTCCTGCA TTTACTGAGG ATACTGCAAG AGCAGTAAAT GTAGTACATG TTGTGGATAC AAGCGGGCAA GATCAAGTGG AATTCATATC ACTATTCTCA AACACTCCTG GAAACCTAAA CATGGAAGCA GAGCAAATCA AAGAAGGTTT CAGATGTGGC AGAGAGAATA AGATTGATTT TGTCAGTTTT GAAGCTAAAT ACAGTTGTGT GACCAAGAAG GACGCAAAGG TTGGATGGGA CAAGAACGAT ATTCCAGTTC TGCGTGTCAT AAACGACAAA GAGCGAGACG AGAGAAGAGT CATAGCGGTT TCAATGGACA CAGGAGGCTC ATCGCGCTGG ACACTTCGCA TTGACATGGA TGAAATAGAA GACTTTACAA TGCAAGTAGG TGAGGAGGAA GAAGAAGAGT TGATGATAGC ACGAGGCGAG AAAAGCTGCA ATGAAGAAGG ATGGCATCAA ATTCAATTCT CAGGTGGTAA AAAGGCACCA ACAAGCTTTG TTCTCAAACT TTACAAGAAG GAGGAAGAAG TATCTGATGA GAAGAAGAAG CAAAGACCTC TCTTGAAACT CAGAACTGAC TTGAACCGTC GCACTCCACA AGTCCAAAGG GTTCTCCAAA GACTTCCTCC ATTTTGCACA ATGTTTGGAA AATCCACTTC TCCTTTTACT CTCGCGTTTC TTGCTTCTCT TCCTTACACC AAATAACACT TCCCCACTCA CTTGGC 
Length2776
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8326257.. 8330835
Download Sequence
A.thaliana
AGI-codeAT5G20660.1
DescriptionZn-dependent exopeptidases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.60555 Ahg496212 PDI-like 1-4
5.2915 Ahg482666 glucan synthase-like 8
10.247 Ahg329973 Protein phosphatase 2A regulatory B subunit family protein
13 Ahg481147 growth-regulating factor 1
14.0712 Ahg472949 adenine phosphoribosyl transferase 1
17.8885 Ahg888770 F-box family protein
20.9762 Ahg935788 sister-chromatid cohesion protein 3
22.5832 Ahg494809 Ubiquitin-like superfamily protein
23.3666 Ahg948606 chromatin remodeling 4
23.9165 Ahg929889 pre-mRNA-processing protein 40C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression