| Annotation |
|---|
| Description | jgi|Araly1|494809|fgenesh2_kg.8__625__AT5G42220.1 |
| Sequence |
CCCGACACAA TCGTCCTTGT TCTTCCCCTT TAACTCCGAA CAAATCAGGC TTTGGTTTCG TGTTTCAACT TTCAGATACT TCTCTAGATT TCAATCGGAG GATCTTTTGT TCCGACAAAG TTTCAATTTT TTAATATCCT ACGACGGCAA AGAGGGTTCA TGGAAGATCA ACCCATTAAC CAGTGCTCTA GTAGCACCAA TGCATCAGAG AAAACTCCAG AATCAACCCT TGAGCTTAAC ATCAAGACGT TAGATTCACG GACGTACACT TTCCAAGTGA ACAAGAATGA AACTGTTTCG CTATTCAAGG AGAAGATAGC TAGTGAGACA GGAGTTCCGG TTGGTCAGCA GCGGCTCATT TTCCGAGGAA GGGTTTTGAA AGATGATCAT CCTCTCTCGG AGTATCATTT GGAAAATGGG CATACTTTAC ACTTGATTGT GAGGCAGCCA GCAGAATCAG TTCCTTCATC TGGTACACCT TCAGAAGGGG CAACTCCAAA TGATGGAAAT AGTACAAATG GTGGACCATC TCGAAATGGA AGACATGTCT CCCACAGCGT AGTTCTTGGG TCTTTTAATG TTGGAGATCA GACAGAAGGC ATTGTTCCAG ATCTCAGCCG GGTCATTGGA GCAGTTCTAA ATTCTTTTGG GGTTGGTGGA CAGCATCCTA CAAATAACAG TACTAATGGC ACGCAATCCT CTATGCCCTC GAATCCGTCT TCTCATGCAC CTCCTGGCAA TACATCTGAT GGAGCGCCTG GCATTGGTGG TCAAAGCCAA GCTACGGGTC ATTCACAACC TAGGCAAGCA TTTCCTGGTG TATCATTTCA AGCATCGATG CCTCGTGTAG TTCAGATTCC GGTTACAGCA GCTACGACGA TTCCTATTCC TACATTTCTA ACGCCTATAC CGGATTCGTT AGACACTCTA GTGGAGTTCA TTAATCGGAT GGAGCAGGCA TTATCACAAA ATGGCTATCA GCCAGATACC TCTTCTGCTA GATCCGGAGG GCGACCAAGG GAAGAGTTGC CTAGAAATAG ACGAGGTGCA GCAACACCTG AAGCACTCTC TGTTGTCCTA AGGAATGCAC AAGATTTACT GAGTGGTCTA GGTGTCTCTT CTTTATCGCA TATTGCGGGA CGCCTGGAGC AAGATGGGTC CTCTTCAGAT CCTACTCTAA GGGCACAAAT CCAGACAGAG GCCGTGCAAG TAGGTCTTGC TATGCAACAT TTAGGGGCCC TCCTACTGGA GCTTGGGCGC ACAATTTTGG CATTGAGAAT GGCACCGTCT CCGGAATTAT CCTATGTGAA TGCTGGGCCT GCTGTTTATA TATCTCCATC AGGACCGAAT CCTATTATGG TTCAGCCTTT TCCTCACCAA ATCAGCCCTC TCTTTACTGG TGCTGCTGCC TCATCAAATC CAGTCACAGG ACCAGTTGGT TTAGGAACTG CCCAAAGGCA CATTAACATT CACATACATG CTGGCACATC AGGTTCACCT ATGATGTCAT CAGTTGGGAA CCAGCGAAGC AATGGAGAAG GAGGGCAAGG AGACCGTGAC AGCAATACGA GTTCAGTTGC TGCGGCTGTT CCATCACACT CTACCGGTGA GAATGTTTCT GCTGGGGTTC AACCTGGTTT GGATGGTGCT GTTTCAGTTG CCCAAATCAA TGCAAGGATC AGAGATATGG TAAACATTAT GCAAGGAAGA AACCAAATTC CATCGGGAAC AGAATCTCTC GAGCGGGATA CGTCTACGGG CCATGGTGTT GCCACTGCTA TACATGAGCA GGCTACTAAC ATTGCAGCTA CTTGCACACC TGAGTCGTTA AGTGGCTCAC TGCATGACTT ACCATCTGAG AGGAGCAATT CAGAGTGTCA AAGTGAAAAA GATCTTGGTG GAGATTTAGG GCATCCAGCC CATGCAAAAG ATATCTCTTG TACTACAGGA CAATCTTCAG CTCCGTCTGG AGATGCTACC GGTGATGCCA AAGAAACCAA GAAGGCTACT CCAGAGGTAG CTACAGCTAC ACCACTTGGA TTGGGGCTTG GAGGTTTAGA CCGTAAGAAA CGAAGCAAGC AGCCGAAGGT ATCAGGTAAG AATGAAGATA GTGGGACTTT AGCTACACTT GAAGGTTTGC AACAGAGCAG TGGGACCAGT GGTCAGCAGC TTTTGCAATC TCTCTTTTCT GGTAGTTCTC GTTCAGATGA GACTGGTCTT AGACGCGGGC AAGGTTCAGA TGATCGGGTA GATGTCTCAA GTGCAGTGTC TCAAGTCCTG GAGAGCCCTG GACTGGATGG ATTGCTAGCA GGGGTATCTC GACAAGCTGG TGTTGATTCA CCAAATATGC TGAGAAATAT GCTCCAGCAG CTTACCCAGA GCCCACAGAT CATGAACACA GTCCAACAAA TTGCCCAACA GGTGGATGGG CAAGAGATAG AAAATATGAT GTCAGGCGGA TCTCAAGGCG AGGGTGGCGG CTTTGATTTC TCTAGAATTG TCCAACAAAT GATGCCTCTA GTCTCACGTG CTTTTAGCCA AGGAGGGCCA TCGCCTCATC CCACAACACA ACAGCCTGAT GATCGTCAAC CTTCTCAGGT AAATGTTCAA TCCATGGCTC AAATGATTGA GCACTCTGAT CCACCAGAGG ATGTCTTCCG TGCAATGGTC GAAAATGCTG CGATGAGCCA AGACGACCTA GTGAATGAGC TTTGCTGTGA TGCAGTTCTT TCTCAAGAAT ATGCAGAGTT GCTAAGACGT GATATTGAAG ACCGGCTAAA AGATGATCAA GGTCCATAAG CTATTTGGTA GAATTGGTTC CATAAGTGTC AGATCTTTAA AGTATCTTTG TTTATTTGTT GAGATCCCTC TCTTTTGTAT TAAGAATTAG GGTTTGGGAT GGTCTACAAC CGTAAATTAT CTGGTCTTTA AAGGGCCGAT TCAATTTGAT ATTTCCTCCT TTAACCAGTT CATATTACTC ATAACTCTCG ACATT |
| Length | 2995 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 6475846.. 6481300 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G42220.1 |
| Description | Ubiquitin-like superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.64575 |
Ahg480601 | ubiquitin family protein |
| 3.60555 |
Ahg486817 | MIRO-related GTP-ase 2 |
| 5.2915 |
Ahg486060 | alpha-soluble NSF attachment protein 2 |
| 6 |
Ahg943823 | HEAT repeat ;HECT-domain (ubiquitin-transferase) |
| 7.74597 |
Ahg495654 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 9.38083 |
Ahg337633 | RING/U-box superfamily protein |
| 9.74679 |
Ahg470259 | AAA-type ATPase family protein |
| 10.583 |
Ahg487099 | NRAMP metal ion transporter family protein |
| 11.225 |
Ahg893981 | Myosin family protein with Dil domain |
| 12.6095 |
Ahg483191 | glutamate synthase 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|