Detail



ID : Ahg477024

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477024|fgenesh2_kg.2__2154__AT1G78600.1
Sequence
AAGTTTCGTT GTGTCGAGAT TTTTTTTGGG TTTTCTGGAT GAGTTTGAGA TAAGAGAGGA TGAAGATTCA GTGCAACGTT TGTGAGGCGG CGGAAGCGAC GGTGCTATGT TGCGCCGACG AGGCTGCTCT GTGTTGGGCA TGCGATGAGA AAGTCCACGC TGCTAATAAA CTCGCCGGAA AACACCAGAG AGTTCCTCTC TCTGTCTCTT CCTCTTCCAT ACCCAAATGC GACATTTGTC AGGAAGCATC TGGATTCTTC TTCTGTCTGC AAGATAGAGC TTTACTATGT AGGAAATGTG ATGTTGCAAT CCACACTGTA AATCCTCATG TTTCAGCTCA TCAGAGATTT CTTCTGACTG GAATCAAAGT TGGTCTTGAA TCTATAGACA CTGGTCCTTC TACAAAATCC TCACCAACCA ATGATGATAA AACCATGGAG ACGAAATCTT TTGTTCAATC TATACCTGAG CCTCAAAAGA TGGGTTTCGA TCAGCAGCAA GGAGTTTTAC CGGAAACTAA AGTCAGTGAT CACACATCTA CAAAGCTTCC TTTCGCTAGC AGCGGATCAA CTACTGGAAG CATTCCTCAG TGGCAAATAG AGGAGATTTT CGGACTAACC GACTTTGATC AGAGCTATGA ATACATGGAG AATAATGGAT CATCTAAGGC GGATACTTGT AGACGAGGAG ATTCAGACAG TTCTTCCATG ATGAGATCTG CCGAAGAAGA TGGAGAAGAT AACAATAACT GCTTGGGAGG TGAGACATCA TGGGCGGTTC CACAGATTCA GTCTCCACCT ACAGCTTCTG GTCTAAACTG GCCTAAGCAT TTTCACCACC ACTCAGTGTT TGTTCCGGAC ATAAATTTTT CAACTCCTTA TTCCGGTTCA TCCCCGAACC AAAGGGTTGG GAAACGGTGG CGACGGTTCT AACATTCACA ACTATCTTTT GGCCGTTTGA GAAAAGAGAT GGGCAGCTTT TCTCAGTAGA TGTAAGATCA CATAAATGAT TTGGAAACTT GTAATGTAGT GATCTGTGAG AGTCCATGTT CTTTGTTAGC TGAAAAAACA AAAAGATGTT AATTTGGTTG AAGGTTATAA GGGACTAAAT TATTAAATTA TCAATTTGGC 
Length1130
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17256013.. 17257564
Download Sequence
A.thaliana
AGI-codeAT1G78600.2
Descriptionlight-regulated zinc finger protein 1
TAIR curator summary
Alias[BBX22][DBB3][LZF1][STH3][B-box domain protein 22][DOUBLE B-BOX 3][light-regulated zinc finger protein 1][SALT TOLERANCE HOMOLOG 3]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg942000 pseudo-response regulator 5
3.74166 Ahg939656 pseudo-response regulator 7
4.47214 Ahg492200
4.47214 Ahg483978 B-box type zinc finger protein with CCT domain
4.89898 Ahg480799 F-box family protein
6.245 Ahg472476 UDP-glucosyl transferase 85A2
7.2111 Ahg921302 gigantea protein (GI)
10.583 Ahg471553
11.225 Ahg486604 Arabidopsis thaliana protein of unknown function (DUF821)
12.3288 Ahg472050 Homeodomain-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression