Detail



ID : Ahg472211

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472211|fgenesh2_kg.1__2165__AT1G19860.1
Sequence
AGATAAAATG ACGATGGTGA CCATAAGAAG AAGAACCCAG AGGATCTAGG GCTTCACAAT CGCTTCCATC TCTCAACTCT CTCTCTCGAC GGATTTTAGC TTACAGATGT TTCTTCTCCT CTCTGGGATT CATCATCTTC TCTTCTTAAA TTCTTCCTCT TTTCCTGAAA AAAGTTAGGG TTTTTTGATA ACTTGGGATG AGAATAATGA TGCTTCAATC TAATTTAAAA GGGTAATTGG ACCTTCCTGA ATCAAAAAGA ATTGATTTTT AGATTGAAAA AAGAAGTGAG AGTTTCTGTA ACTATGAGGG CATTGCACAA AAGGGTATCT TGGCCACCAG ATTTTAAACT TTGTCAGGTA CGGCTATTCA TATCAGAGGA TTCACCTTCA CAAGTTGGAT CAGAGTCTCA AGATCACCTG CAAGCAAAGT CACCATTGGC TTCACATCCA AGTGATGATA ATCTACCACC TGGTTTTGGT GGACCTCTTT CTGCGAATGA GTCCCAGATT AAGTTATCAG ACATCCCAGT AATAAAGTGG AAATCCTCCG TCCGGATTCT GCTAGATGAG GAATGGAGAG TGGTTGCAGG GGACGAAAGC AAAGAAGTGG AGGTCCAAAA TCAGAGGGAA TTGAGAGTTC TTGAAGCATT TTATCCTGGC GCATCATCTA TTCCTCCAAA CCCTTCGGTT CCAGCTGATG TTGAGAACCA TCATGATGAT CAGCAAACCA TTGTCATACC CATCCTACCT GTAGAAGACG ATGACATAGC GTTGGATTCA GCATCTGATT TCCCAACCCA ATCTGGCGTG GATGTGGGAA CAGATCCATC AATAACGGAT GAGAATACAT CAACTTCTTC AATCCTCCCT GCAGGGCCAG AGATAATGGC TGCATTATCT GCAATCTCAA ACAGCAAAGA ACAAGGCAGC AGCATGATCG ACCAAGATCT GCTTATTAAA ATCCTAAGCA ACCCTAAGTT GGTCGAGAAT CTTGTTGCAA ATTCTGGCAG TGCAGGTTCA GTTTCCTCCA ACGCAGGTAG CCTCTACCCA TCTTCAACAC ATGAAGCCAA TGGAGTAGTA ACTACAGCAC CCACTTACTC GAATGGACAA TTTTACCCTC AGCCATCCAT AACCCATATT CCTCCCATGG CGTTTACTCC TCTAGACCAA CCAAACTATG GAGCACCTCC AGCAAGAGAT GCTAGTTATT ACAAGAACCT GATTCAGCAA CATGGCGGGG ATAGACAAGA GATGCCGCCA GTTCAACAAC ATCTTGGTTA TCGTTACAAC CCCCAACCTG GAGGACCTAA CACGGAGATG GTAAATAGCA ATACTAATAA CCAGAGGCCA AGGGACTCAA AACCCAAGAT AATGAAGCCT TGCATGTACT TCAACAGTAC GAGGGGTTGT CGCCATGGAG CCAATTGTTT GTACCAGCAC GATGCTACTA CACCTTACCA GCCGAGGAAT CTAAATAATG GTAATATCAA CACTTCTGAG ATGCAGAATG CAAAAAGAAT GAGATTTGAC AGAGACTGAT GCAGAATTAG CATACCACAC ATGCTCTTTG CCTCTTGGT 
Length1579
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8078511.. 8081661
Download Sequence
A.thaliana
AGI-codeAT1G19860.1
DescriptionZinc finger C-x8-C-x5-C-x3-H type family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5 Ahg356151 DNA/RNA polymerases superfamily protein
9.48683 Ahg321659 Nucleotidyltransferase family protein
14.1774 Ahg483117 appr-1-p processing enzyme family protein
14.5602 Ahg938850 DNAse I-like superfamily protein
14.8324 Ahg328819 Tetraspanin family protein
21.166 Ahg487064 Pentatricopeptide repeat (PPR) superfamily protein
25.0599 Ahg928272 Tetratricopeptide repeat (TPR)-like superfamily protein
27.2213 Ahg483494 Transducin/WD40 repeat-like superfamily protein
30.1993 Ahg943494 poly(ADP-ribose) polymerase
30.8221 Ahg470624 SKP1/ASK-interacting protein 16
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression