Detail



ID : Ahg943611

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943611|scaffold_604155.1
Sequence
TGTCATTCTT CATCAACGAC GATGATTTGC CATGTGTGCG AGAGCGACAG CTTTGAAGAT GGAGGAGATG GTTTTTTTTA CTGCCTACAA TGCTCTACTC AGGCGGACGG TATTATCCAA ACAAGCGTCG ACGGCGAAGA TTTGGGCGGA GCCGGCGGTG GCGGAACTTA TCGAAAACAA GACACTCGCC CTGAACCAGC ACCAAACCCA GAGCCTGTCA AATTGAGTTA CGAGGATTAT TACAAGGAGA CCAGAGATAG ATACGTCAAA GGTTTACTGA CGATGATAAC TTATCAGTGC GATGCGTTGG TTGAGAAATT CAATGTGACG CCATTGATTA TTGGTTTGGT CGATGATGAT TGGGCTGATA AGGCGATTCT TGAATCCGAG CTCCAATCAG AGGGAGAAGT AAGAGAGCCA GAGGTTAAGC GTGGTAAAGC CTCTGAAGAA CCTCAAAACT TATATGGAAA AAGAGCAGTA ACGATATGGT TAAGTCAGCT TAAAAAGTCT CTGCCTTTAT CGTCTTCTTT GGCTCTATCT TTCCTTGCTT GTCACAAAGC TGGAACACCC ACGGATATAG TTAGATGGGC ACGACAAGGA AAGTTTCCGT ATCTTTCTTC TTTTCTCAAG ATTCGAGAGC AAATGGGAGA CAGATCAGCT GCGTGTCCTG TGTCTGTAAG CGTGATGTTC AAGCCTAGTC AGATTGTTTC TGCTCAGAGA TTAGAAGCTC AAGTTGCTTC CATTGCTGAT ATCATCGGTT TGCCTTTGCC TCCTGTGAAT TTCTATGGTA TAGCGTCAAA CTATCTAGAG CGGTTGTCTA TTCCCAAGGA GAAGGTTCTT GATCTGGTCC GTCTCTTACA CAACTGGTCA ATGTCTTCCG ATTTGTATCT ATCAAAGAAC GTGCTCAGGC TTCCCACTCG TGTCTATGTC ATGTCTATTA TTATCGTAGC TATTCGGATG CTTTATAATA TCAATGGTTT TGGTGTATGG GAACAAAGCT TGGGTTTGCT TGATGCTAGT GAGGAGGATG TCACCAAAGC AACTGAGGAG CTTTTGAAAA ACCTTGAAAC GAAATATCAC GAGGTCGCTG CTGAATCCGT TGAACATGAA AAGGATCTTT TGTCATATTT ATTGCATGGG AAAAACGAGA TCTTTGCTGG CTTAGAAGAA GCATCAGCTG ATGACACATA CAGAACTGTT GATAATCTGT GGAATAGTTA CCCGAAAGAC CAGTTGAGGG ATAGGAACAA CCCTTGTAGC AGTCGTTCAA GAAAAAGCAA AACCGGGTCA ATGGATCGTG ATGAGCCATC TTTGGAAAGT GTTTCATCAC CAGATAATCA TAATCACGAA GAGAAATCCA AGGAGAAAGC GATAAGAAGA CTAATAACAG ACATGAGGGA CAATTTGTTC CAATACATAC CGCCTCGTGT GAAGGTAAAG AGACTAGACT ATCTTCAATA TGTGAGGAAA AATGATGATG GAGCATTGAT ATACGCGGGT CATGCGGATT ACTACATTCT TTTACGGGTT TGTGCTATGG TCGCTGAGAT TGATGCAAGG AATATGCATA GAAGTGTGTT GAGCTTTGAG AGAAGATTGG CTTGGATCGA GAAAAAGATA GATCATGTTT TGCATCTAAC TCCACTTTCT ATCCCTTTTT AAGATACAAA GACACATTTG GAT 
Length1683
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22879844.. 22881871
Download Sequence
A.thaliana
AGI-codeAT2G02955.1
Descriptionmaternal effect embryo arrest 12
TAIR curator summary
Alias[MEE12][maternal effect embryo arrest 12]
Gene coexpression
MR
MR Locus Description
66.2722 Ahg474246
72.4224 Ahg488838 RPM1-interacting protein 4 (RIN4) family protein
73.1163 Ahg924077 Pentatricopeptide repeat (PPR) superfamily protein
79.4607 Ahg924499
90.305 Ahg478704 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression