Detail



ID : Ahg943920

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943920|scaffold_700149.1
Sequence
GTGTGGCTAG GTCTTTGAAG ATGCTTGGTA ATGTGAAGCT GGCAGAGGAA GGCATGCTGA GGGTGCTCTT TTCTGCTGTG TATCTATTGT CGCACAAGAA TAGAAACGAT AATCAGATTT CTGCTGTATC TAGGCTCCTT GGATTGGCTA CAAGGTTTGC GACTGAGATG ATTCGCATAT ATGGGTTACT TGAATATCAG AAAGATGGAT ACATGTTGGA CAGCAAACCT AGGACACAAA TACTTTCACT TCCACCAGTT TCACTTCATA TTGATGTAAT GGAAAATTCA AGGAGGTTGT CAGAGATGGG TTATCTTTTA GAGATCACCC GAAATTTTCA ATCCCGTATT ACCAGAAAGT TTAAGAAGCT AGGAAAGGGA AAGAATGAAA AGTCACTGAA CCTGGTAGAC CCAAATTCTT TGCAGGATGA TTCTCAGCTT GAAATTGTTC CAGATCCAGC ATCTGCAGAG TCAAGACAAC TTGACACGTC TTTATTCGAT ACCAATGGGG AGCTTGCTTT GACGCCTATG GGTATGATGA CAGCCAAAGC TGGTCAAATC ATTGGCGAAA GAAGTTATGC ATCTGGCCTT GTACCCCAAG TGGTAGTTGA AGAGAAGAAA GTTCTTCCTC TGGAAAATCC CAAGGAGATG ATGGCTCGTT GGAAGGCTAA CAATCTGGAT TTGAAAACTG TGGTTAAGGA TGCCTTGCTC TCTGGTCGAC TCCCTTTAGC TGTTCTCCAA TTGCATCTTC AACATTCAAA AGACGTGGTT GAAGATGGAG AGCATCATGA TACATTTACT GAAGTTCGTG ATATCGGAAG AGCTATTGCT TATGACCTAT TTTTGAAGGG TGAACCTGGG GTTGCCATTG CGACTCTGCA AAGGCTCGGA GAGGATGTAG AAGCGTGTCT CAATCAGTTG GTATTTGGCA CAGTGAGAAG ATCTATTCGA TATCAAATTG CTGAAGAAAT GAGAAAACTT GGTTTCTTAA GACCATATGA AGACAATGTA CTGGAGAGGA TATCTCTTAT CGAGCATCTC AAGCTTGATT GTGGTGAGGT TGATGGTGTT GTTCTAGGTT CTTGGACTAA AATCAATGAG AGTGCATCTG AGCATGCGCC TGATGAAACC GATGCAGTTG CTGGCTACTG GGCTGCAGCA GCCGTGTGGT CAAATGCTTG GGATCAGAGA ACATTTGATC ATATAGTCTT GGATCAACCC TTAGTCATGG GTGTTCATGT TCCATGGGAT TCTCAGCTGG AGTATTATAT GTGTCACAAT GATTGGGATG AAGTCCTTAA GCTGTTGGAT CTCATTCCTG AGGATGTTTT ATATGATGGA AGTTTGCAAA TTGCTTTGGA TGGTCCGAAA CAGTCTTCTG GCGTAAATTA TTCAGTTTCT TCCCGTAGCG AGTATATATG CTCCATCGAA GAAGTGGATG CTGTACTTAT GGATGTTCCT TATATCAAGA TATTTAGATT ACCTGCAGAT ATTCGGTGCT CCTTGTGGCT AACAGCACTC ATGGAGCAGG AACTTGCAAG AAAACTTATA TTCTTAAAAG AATATTGGGA AAACGCTCTA GATGTAGTAT ATCTTCTGGC TCGGGCAGGT GTTATCCTTA GTAATTGTGA AGTTTCATTT AAGGAGGAAA CTTGTAGGCC ATCCTTAGAT CTTTGTTTGT CCATAAAGAA GGGAGGGGCA AATGTTGATA CCCTGAGTGC TGTACACAAG CTATTCATAC ATTATTGCAC ACAATATAAT CTGCCAAACC TTCTGGATCT GTACCTTGAT CATCACGAAT TGGTCCTAGA TAATGATTCA CTCAGTGCAT TGCAGGAAGC TGTTGGTGAT TCTCACTGGG CAAAATGGTT GCTACTCTCC AGGATCAAGG GCCGGGAGTA TGATGCTTCA TTTTCAAATG CACGCTCAAT TATGTCACGT AGTGGGGCAC CAAATGGTGA ACCCAGTGTT CCAGAGACTG ATGAAATTGT TTGTACTGTT GATGATATTG CCGAAGGGGC AGGAGAAATG GCAGCTTTAG CAACTATGAT GTGTGCTCCG GTGCCAATTC AAAAATCCTT GAGTACTGGC AGTGTGAACA GGCACACTAA CTCTTCTGCG CAGTGCACTT TGGAGAATTT GAGATCATTT CTTCAGAGAT TCCCTACCTT ATGGAGTAAG CTTGTTACTG CTTGTCTTGG GGAAGATATA TCTGGGAACC TTTTGCGGAC CAAGACTAAG AATGAGTATT TGAATTGGCG TGACGGTGTA TTCTTTTCAA CTGCACGTGA TACCTCACTC CTGCAGATGT TGCCTTGTTG GTTTCCTAAG GCGGTTCGTA GATTAGTTCA GCTTTATATC CAGGTATCCA TTTCTGATTT GTATGTCGTA TGTGCTCTTC TGAGTTGTAG AACACTCCTT CAACTTTCTG GAATTGAGGA TCTAGTTCAA CTCAATACTT GCACTGTAAT CGGCGATATA ATAAGCTTAA GAATTTCTAT GAAATCATGT GATGGTTGTG AAAAGGCAGA CATATGAAAA CCATTAGGGG GAAGTGAC 
Length2558
Protein Sequence
Protein Residue
Map Locationscaffold_7: 520408.. 524687
Download Sequence
A.thaliana
AGI-codeAT4G39420.2
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.87298 Ahg948161 RGPR-related
9.8995 Ahg907919 Protein kinase superfamily protein
10.9545 Ahg489679
11.4891 Ahg943440 Tetratricopeptide repeat (TPR)-like superfamily protein
12.1244 Ahg908250 Mannose-6-phosphate isomerase, type I
12.49 Ahg925208 binding
12.8452 Ahg495818 Ypt/Rab-GAP domain of gyp1p superfamily protein
13.0767 Ahg357440 C2H2-like zinc finger protein
15.6205 Ahg340395
15.748 Ahg343256 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression