Detail



ID : Ahg944668

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944668|scaffold_700897.1
Sequence
CCTCTGCAGC TTCGAGTATC AAGATGTTTT CAATTGCAGC GATCAATGAT ACAGAGACCA CAGAGAAGTG GGAACCTTTA GCTCCTAGCA AAGAAGCTCA GGAGTTTCAT CTGTCACAAA CATATCATGA TGGTCTTCTC AAGCTGCAAG CTAAAGACTA TGAAAAGGCT CGGGAGCTGC TAGAATCTAT CCTTAAGGAT CCTATTATAG CTAACTCCAA AGTGGAGACT ATTGCAAACG ACAATCATCT CCATCATCTC AGATTTTTGG CTCTGAAGAA TCTTGCCACT GTATTTCTTG AGCTTGGTTC AAGTCATTAC GAGAGTGCTC TAAACTGTTA TCTTCAAGCT ATAGACTTAG ACGCAAAAGA TTCTGTCCTG TGGAACCATC TTGGAACCCT ATCATGTTCT ATGGGATTAC TGAGTATCTC ACGATGGGCA TTTGAACAGG GACTTCTCTG CAGCCCCAAT AATTGGAACT GCATGGAGAA ACTTCTAGAA GTTCTCATTG CTATAGGTGA TGAAGTTTCC TGTCTCTCAG TTGCAAATCT GATTTTAAGG CATTGGCCAT CACATTCTCG TGCTTTGCAT GTTAAACATT GTATTGAAGC AACAGATTCA GCTCCTTTTG CGCCCAAGGG TATAGATAAA CTTGAACCTC AGCACGTCCG GCTCAAATTT CTTGGCAAAA GAAAGGTGTC TGACATGAAT CAGGACATGG ATGCTGCCTC CAAGAAGTTG AAAAAAAGAG TGCAAGTTAA ACTTCCTGAA GCTTCATGGG TGGCACTGAT AAATATTCTA ATTGGGATAG TGCATCCTTC GCGTGAAACT GTGGGCATAT CAGCTGATAT ACCAATAACC ATTGAACTAG CCCTTAGTAC TGAGGCTGTT ATGCAAGGTC TGAAAAAGAA GGATCATTGT GTGGATTCAG ATTCAAGTAA TGTGTCTGTT AAGGATTGTA ACATCGAAAG AGAAAGTGGT GGTTCTGTAA AAGAAAAAGA GCCTGTGTTT TCTGAAGAAC ACCCCCAAGA GAGGCGGAGT ACTCGTCTTG AACGGCTTCG GAACCAGAAA CCTGAGAAGG AAGAGTTAGA ATTTGATAAT AGCAAGGATC CTAGCAGTGA CATCCTTCAA TATCTTGAAA AATTTGTCCT TACGAGGGAA TTCAACAGAG TTTCTGCTGG TTCTTTCTGC CTTGAGGAAT CTGATCCAAT TTCTGAACAC GCTGTCGTTT CTAATTTTGT GAAGGAAAAT TCAGAAAATT ATGGTGCGTA TCATATGGGT CACTTGCTTC TAGAATATAT TGCTAGTAAA TGTGAACATA TATTGAGTCG TGATGCTGCC TTGAAAATTT TGGAGTTAGA AAAGCTAACA AGACATTGGG GCCGAGATCG GAAACCTGAA TGCAGTCTTT TTCTCGCCGA GCTGTACCAT GACTTTGACT CTAAAGGTTC AGATATTCCT GATGACCGAT CATGCATGGT TGAAATAACA TACCATCTCT CTAAGATAAT TGAATCTGTC TCCCTTGATT ATGCTATCGA CTTTACGCCT AGTTCTTGGG GGGAAAGATT TTCTGACTCC TCATTCAAGG CTGCTAAAGA GGTGTTAGAT TATGAGAAAA GATCTTTCTG GGCTCAATAT TTCTGGCTGA GTGCACGGTT ATCAATTTTG GAGGATAATA AAGCTAAAGC ACTTGAAGAA TTTCTTAGAT GTTTGTCATT GTTGGACAAG GAAGGTATCG GAGAAGCTCC TGTCTTAATT CAGCTACCTC ATTGCAGAAG AATTCGAGAG CTGAACATTA ATAGAATCAT TCATGAAATA AATCTGCTTA AGACTGATTT CTTGTTGGAA AATACCATAC CTGAGATGAT GGAGAAAGAA TTTTATTCGG AGTGTGTAAA TTTACTGGCA CCTCTTTTAT TTCCAAATAA AGACATGTTG CCTGCATACG CTGTAAAAAC GGAAGAAGGG ATCTCCTCTG TTGAGTTATC AGCACTTGAC GTTTTAATAA AAGCCTGCCA GAAGAGTAAG CCTATAGATG TGGAGGTTTA TATGAACTGT CATAGAAGAA AGTTGCAAGT TCTCTTGGAA TCAACTGGTA CGGGAGAATC TGTTGTGACA CCTAAAAAGC CGTATAAAAA TTCAAATGAG AGTTGGGATC ACTTGGTGGC GGAGGAAGTC AAGGCAATTC TTCTCTGTAT CTCTCAAGTG AAGAACTCCC TTGACCAGTC AGGAAACTCT AATGACATGG TTGCCCCAAA ATATTGTGTA GCTGGTATAC AAGCTCTGCT TTTGAGAGTT ATGTCAAATA TCATGAGGCA TTTTCTTTCT AAGAGATATT CAGATTCTCA AAATGCTGAT GGGATTGAAG AAGAGAAGAA GTTTTGCTTT CTCGATGCAG CTATTGGATT CTGTAAACTT CAACACCTTG ATGCTACCAT GTCTACCAAA TACCAAGTTG AGTTGATCAT AGGTCTCCAT GATTTGCTTG CTGAATATGG GCTCTGCTGT GCTGGTAAAA ATTGTTCGGG GGAGGAAGGA GCTTTTCTTA GATTTGCGAT TAAGCATTTA TTGGCTGTGG ACATGAAAGT CAAATCCAGT ATTAACTCCC CAGATGGTCT TGGACATGAT ATGGCACTGC CTGACAAATT ATGCAGAAAT GAAATAAAAT CATTTCTCAC AGAGGTGCAT ATTAAGAATA ACGAAACCAA CAAAACTGAT TCTAAGAAGG ATGGTTCTGA AGAACAAGTT GGTTATAGGG AAAAAGAACA GTCAGAACAA GAAAGCAAAC AGATTACAGA ACACACAGAA GTGGTTGCGG AAGAAGAAAA AGATGAACCT GAGTTGTTAA TCAACAACGC TTTAGATCAA TGTTTTTTTT GCCTTTATGG TCTAAATCTT AGAGTCGATG GTTCCTACGA AGATGAGCTC GCTGTGCACA AAAACACTAG CCGGGGAGAT TATCAGACCA AGGAACAATG TGTTGATGTC TTCCAGTACA TACTACCCTA TGCCAAAGCT TCATCTAGAA CTGGACTAGT TAAACTCCGA AGAGTCTTGA GAGCAATAAA AAAGCATTTT GCACAACCAC CAGATGATCT CCTAATTGGC AATGTGATAG AGAAATTCTT AGATGACCCT GATTTATGTG AAGACAAACT CTCATATGAG GCTGGTTCTG AAGGTTTCCT TGAAACCATA ACTAAATGTC TAATTCCCAG CAAAACTCTC ACTCAGTCTG AAGAAGTTAG TGCTAGTGAT AAATGGCCCG GCTTTGTTCT GACGAAGGAA GGAGAAGAGT TTGTACAGCA GAATACAAAT CTGTTCAAAT ATGATCTGAT CTATAATCCT CTGCGCTTTG AGAGTTGGGA AAAGCTTGGC AATATATACG ACGAGGCAAG TTCTTTCATT CATTCTTGTT GTTACTGTTT TTCTGAAATT TTACCTTCAA ATAGCAGATG GAGGAAAAAT TCCGCTCTTT CGCAAAGAGT TGAGACAAGC AGAAGAAGAA GCAGACGTTG CCTGCTAATG AGTTTGGCAT TGGCAAAATC ACCAGATCAA CAGTCTGAGA TACATGAGTT TTTGGCGCTG GTATACTATG ACAGTCTTCA GAGTGTTGTG CCGTTTTATG ATCAGCGGTC TGTGCTACCC TCCAAGGATG CAACATGGAC AAGATTTTGT GAGAACTCAA TGAAGCATTT CAACAAAGCC TTTGCACATC GACAAGATTG GTCACATGCA TTCTACATGG GAAAAATCAG TGAGAAGCTT GGGCACTCAT ATGAAATTTC TTTATCCTAT TATAAGCAAG CCATGACATT AAATCCGTCA GCCGTAGATC CTGTGTATAG AATGCATGCT TCTCGTTTGA AGCTGCTAAA TGCATGTGGG AAACAGAACT TAGAAGCCTT AAAGGTCCTC GCCTCTTATT GCTTTGATGA ATCTATAAAG GATACTGCTA TGACAATCAT TGGTACAACG ACTTTTGGAT CCTCTCGTAC ACTGGAAGAA GCTCAAGATG GAAACTTGGA AGCATGTTAT GCTAAAACTG GAGAGGGATC AATTCAGATG GAAGGGGTAT GGCATATGCT CTACAACGAC AGCCTTTCTG CACTGGGAAT TTGTGTTGAA GGAGATCTTA AACACTTTCA TAAGGCGAGA TACATGCTTG CCCAAGGACT GTACAGAAGG GGTGGGAGCA GTGATCTGCA AAGAGCAAAA GAAGAACTTT CTTTTTGTTT CAAATCATCC CGGTCAAGTT TTACGATCAA TATGTGGGAG ATTGATGGCA TGGTTAAGAA GGGAAGGCGG AAAACTCCAG GTTTGGCGGG GAACAAGAAG GCTCTTGAAG TTAACCTGCC AGAAAGTTCA CGGAAATTCA TTACCTGCAT TCGCAAATAC TTACTGTTCT ATCTGAGACT ATTGGAGGAA ACTGGAGATG TCAACACACT AGAACGAGCC TTTAATTCTC TTCGATCAGA TAAGAGGTTC TCTCTATGCA TTGAAGACCT TGTACCAATT GCAATAGGAA GATACATAAA TGCACTGGTT TCCTCGATGA GCCGGGTTGA GTCTGCAGGA GCAAATATCA ACCCTGATAG TCAGCTAGAG AAAATATTTT CCCTCTTTAT AGAACAAGGA AGCATATGGC CGGACATATG CAATTTCCCT GAAATAAGAG GTCCAGAAAC CTCAGAAAGC AGCTTATACA GATATCTACA TCAATACATC GTATCTCTTG AGCTAGACAA CAAGGTTGAG ACCCTGGAAA CCATTAATGA AAAGATTCGA AAGCGTTTCA AGAATCCAAA GTTGTCTAAT ACTTTTTCGG CAAAAGTTGG CAGACATGCT TCTCTTGCTT GGTGCCGAGC TCTGATAATA AGCTTGGCAT CGATAACCCC CTTGCAGCAA GCATCCTCAG AGGAAAGTCC AGCAGTAACT CCATCATTTG GTTTACTGGA AAAAAGACGT GTGCTTTGTG TTGATCTACA GTCAGAATTC TGGAGTTCTT CGTTCGAGGA TCCCTTAGAA TCCCAAATGC TTGAGGCAAA ATGGCTCCCT GTTCTGTCCA AGATCAAGAA CGTACTGATT TTCAATAAAG TTTTGGAGGA GAATCTGGAG GTCGCTAATG CCCTACTTAA AAGTTGTTAC AATTTCTTCC GAGAAACTGC CTCGGTGACA CTCCCTTCTG ATATCAACCT CTATTTCGCA CTGCCTCAAC TAGCGCCAGC AGGAGAACTT CCAGGCAGTG AAGGAGTTGA AGTCATTGAT GTAAGCATCC CAAGGAAGCT TCTTTTGTGG GCTTACACGT TGGTTCATGG ACATTGTGGA AGCATCTCTC AGGTCGTGAA ATATATGGAA GAAAATACCA AGGTACGGAA TACCAAAACT GTTTGTGACA ATTGCAGCCA AAAATTAAGA GAGGAGCCTC AACTTCATCA GTGGTTCCTT TGGTTCAATC AGATATTACT TTTGGGGAAA TCCTATGAAA AGGTTCGGAA CATCTTATAT AGCAAAAATG TTGACGCTAC TCAGTTTGGA ATTTCCTATT CGTGGTAGAG AATGAGTGTT CGTAAGTGG 
Length5579
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3380833.. 3390646
Download Sequence
A.thaliana
AGI-codeAT4G32820.2
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg930446 RNA recognition motif (RRM)-containing protein
11.4891 Ahg494914
12 Ahg492998 SCAR family protein
12.8452 Ahg943453
13.8564 Ahg485584 Dihydrolipoamide acetyltransferase, long form protein
21.0238 Ahg480415 Putative endonuclease or glycosyl hydrolase
21.9317 Ahg900511
22.4499 Ahg470561 beta-hexosaminidase 2
23.1733 Ahg931532 transportin 1
24.5967 Ahg488313 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression