Detail



ID : Ahg480415

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480415|fgenesh2_kg.3__3116__AT2G15560.1
Sequence
ATATGCTTTC TCTGGACAAA CGCAAAAACT TTTGAAGAAC CCTAAAAATC CCAAAATCCG CCGAAGAAGA AGATCGAGAA GAATCAACTA CTAATCTGAA GAATTCGCGA AATTCCATCT TCGTATCGTC TACGCCTGTG TATTCAATCT TCAAGATCCG GAGCCTTTGA TGATACACAA AGCTATGTCA AGTTATTATA ATCCATCAGC AACAGCTTTA GTCTCTATTG ATTCTGATGA ACAAAGAAGA ATCAAATATT TAGCAGATTT GAACATGATT GCAACACAGA GACATTCTTC TACAGATGGT CCTATGGCTA TTCTCTGGGA TATGGAGAAC TGCCCTGTTC CTAGCGATGT ACGTCCTGAA GATGTGGCTA GTAACATAAG AATGGCGATT CAGTTACATC CGGTGATATC CGGTCCGGTT GTTAACTTCT CGGCTTACGG AGATTTCAAT GCTTTCCCTC GTCGGGTTCG AGAAGGTTGT CAAAGAACCG GTGTGAAGCT TGTTGATGTA CCAAATGGTA GGAAAGATGC ATCTGATAAA GCGATTTTGA TTGATATGTT CTTGTTTGTA CTTGATAATA AGCCGCCTGC GACTATTATT CTCGTATCGG GAGATGTTGA TTTCGCGCCT GCGCTTCATA TATTGGGTCA GCGTGGGTAC ACTGTGATTC TTGTTATACC TTCTAGTGTG TATGTGAACT CAGCTTTGTC TAATGCTGGG AGGTTTGTTT GGGATTGGCA TAGTATTGTT CACGGTGAAG GCTTTGTGCC GCTACGTAAA CCTCGTGTTG TGCCATATCT TATGGGGTGT AATATCAGTG ATAATAGTAA CATGGATGGT ATGAATGAAG ATGAAACAAT TCTCTATAGA GGTAACTGTT ATAGTAACCC AAGAGAGTCT TCCTTGATGG TTTCGAAGTT TCATAACGAG TATAGTAGCA GCGCAATGTC GTGTTGGCCA TCTAATTCAG GCGAGTCTTT GGCATATCCT CCTCCTGGTC ACCTTGAGTC CACCATGTGG GTAGCGCCGG GAGATTTAAA CGGTTTGAAG GGACAGCTTG TGAAGCTGCT AGAGCTCTCA GGTGGATGTA TTCCTCTCAA GCGTATTCCT TCTGAATACC AAAGGAATTT CAGTAAACCG CTTTTTGTAT CGGACTACGG GGTGCACAAG CTTGTGGATC TGTTCAAAAA GATGAGTGAT GTGATTGCAG TGGATAGTAA AGGCAACAAG AGAATTGTTT ACCTGCGCAA CTCCAAACCG AACGTCATCT CTCCGTCTCC CCCTGTGGTT CTACTGAGAA GAGAGAAGAA AGGAAAAGCG CCTAACGGGG AAACTACCAA TGGAGGAGTC TCCTCTGATG AAATCTCAGA CACGGGCTCG GTTCAGAGCG AGAGGAACCT CGAAGAGTTC AAATTCGAGC TACAAGACAT TTTGGTGAGC TATTGTTGTG AGGTACAGAT GGATTGTTTT GAGGCGATAT ACAAGCTAAG GTACAAGAGG CCATTGCCCT ACAAAAAGAT GGGCGTGAAT CACTTGGAGC AGCTCTTTGA CAAGTTCAGG GATGTTGTTG CCATATATGA AGATCCAGCT ACAGGGAGGA AACTCATCAA CCCGGTTTAG GGGAGCCTAA CTCAGGTTCA TATAAGATCA GACTTCAGAC GGTGCGTTTG TGAGCCGTTT CTATGCGTTC TCTATCACTC ACTGGGGACA AGCAATGTAA GCTCCTTGCC TGAGAAGCTC TCAGTATTAA TGTATATGCT CTCTACTCTT TCCTTAGGAC AAAATGTTTA CACGGAAGCT TTGATTCTGC ATTGCAAGCA TTTCACTTCT GTTACTTTCG AGAAATTGGA AAGAAGTCAG ACGGAACGTT TTATGTGTTG TTCTCTAGTT GGGAACAAGC CAGTATTATT GTA 
Length1923
Protein Sequence
Protein Residue
Map Locationscaffold_3: 18969240.. 18971333
Download Sequence
A.thaliana
AGI-codeAT2G15560.1
DescriptionPutative endonuclease or glycosyl hydrolase
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.47214 Ahg493637 phytochrome C
4.58258 Ahg888770 F-box family protein
7.87401 Ahg942709 SPla/RYanodine receptor (SPRY) domain-containing protein
11.225 Ahg493610 Tetratricopeptide repeat (TPR)-like superfamily protein
16.9706 Ahg912447 Family of unknown function (DUF572)
18.4391 Ahg933875 Transducin/WD40 repeat-like superfamily protein
21.0238 Ahg944668 Tetratricopeptide repeat (TPR)-like superfamily protein
23.6643 Ahg897649 RING/U-box superfamily protein
25.3772 Ahg470813 ER-type Ca2+-ATPase 1
29.0517 Ahg942849 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression